Gene : Prupe.1G002600 P. persica v2.1
Defline:  (1 of 2) PF13249 - Squalene-hopene cyclase N-terminal domain (SQHop_cyclase_N) Genomic Order:  26
Name:  ? Prupe.1G002600 Secondary Identifier:  ? PAC:32111103
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ppersica PWY-112 Prunus persica pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Prupe.1G002600 0.5kb upstream 0.5kb upstream 3737 true Pp01: 276340-280076 Prunus persica
Prupe.1G002600 0.5kb upstream 0.5kb upstream 500 false Pp01: 276340-276839 Prunus persica
Prupe.1G002600 0.5kb downstream 0.5kb downstream 3737 true Pp01: 276840-280576 Prunus persica
Prupe.1G002600 0.5kb downstream 0.5kb downstream 500 false Pp01: 280077-280576 Prunus persica
Prupe.1G002600 1.0kb upstream 1.0kb upstream 4237 true Pp01: 275840-280076 Prunus persica
Prupe.1G002600 1.0kb upstream 1.0kb upstream 1000 false Pp01: 275840-276839 Prunus persica
Prupe.1G002600 1.0kb downstream 1.0kb downstream 4237 true Pp01: 276840-281076 Prunus persica
Prupe.1G002600 1.0kb downstream 1.0kb downstream 1000 false Pp01: 280077-281076 Prunus persica
Prupe.1G002600 2.0kb upstream 2.0kb upstream 5237 true Pp01: 274840-280076 Prunus persica
Prupe.1G002600 2.0kb upstream 2.0kb upstream 2000 false Pp01: 274840-276839 Prunus persica
Prupe.1G002600 2.0kb downstream 2.0kb downstream 5237 true Pp01: 276840-282076 Prunus persica
Prupe.1G002600 2.0kb downstream 2.0kb downstream 2000 false Pp01: 280077-282076 Prunus persica
Prupe.1G002600 5.0kb upstream 5.0kb upstream 8237 true Pp01: 271840-280076 Prunus persica
Prupe.1G002600 5.0kb upstream 5.0kb upstream 5000 false Pp01: 271840-276839 Prunus persica
Prupe.1G002600 5.0kb downstream 5.0kb downstream 8237 true Pp01: 276840-285076 Prunus persica
Prupe.1G002600 5.0kb downstream 5.0kb downstream 5000 false Pp01: 280077-285076 Prunus persica
Prupe.1G002600 10.0kb upstream 10.0kb upstream 13237 true Pp01: 266840-280076 Prunus persica
Prupe.1G002600 10.0kb upstream 10.0kb upstream 10000 false Pp01: 266840-276839 Prunus persica
Prupe.1G002600 10.0kb downstream 10.0kb downstream 13237 true Pp01: 276840-290076 Prunus persica
Prupe.1G002600 10.0kb downstream 10.0kb downstream 10000 false Pp01: 280077-290076 Prunus persica

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029665 5273 Angiosperm View MSA
122237205 5265 Fabidae View MSA
124074519 5270 Rosid View MSA
123750471 5271 Pentapetalae View MSA
122795887 5272 Eudicot View MSA
121298968 5274 Embryophyte View MSA
123336900 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain