Gene : Prupe.1G539400 P. persica v2.1
Defline:  (1 of 1) PTHR11680:SF12 - SERINE HYDROXYMETHYLTRANSFERASE 2, MITOCHONDRIAL Genomic Order:  5394
Name:  ? Prupe.1G539400 Secondary Identifier:  ? PAC:32117779
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ppersica GLYSYN-PWY Prunus persica pathologic  
Ppersica PWY-2161 Prunus persica pathologic  
Ppersica PWY-3841 Prunus persica pathologic  
Ppersica SER-GLYSYN-PWY Prunus persica pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Prupe.1G539400 0.5kb upstream 0.5kb upstream 7046 true Pp01: 44082166-44089211 Prunus persica
Prupe.1G539400 0.5kb upstream 0.5kb upstream 500 false Pp01: 44088712-44089211 Prunus persica
Prupe.1G539400 0.5kb downstream 0.5kb downstream 7046 true Pp01: 44081666-44088711 Prunus persica
Prupe.1G539400 0.5kb downstream 0.5kb downstream 500 false Pp01: 44081666-44082165 Prunus persica
Prupe.1G539400 1.0kb upstream 1.0kb upstream 7546 true Pp01: 44082166-44089711 Prunus persica
Prupe.1G539400 1.0kb upstream 1.0kb upstream 1000 false Pp01: 44088712-44089711 Prunus persica
Prupe.1G539400 1.0kb downstream 1.0kb downstream 7546 true Pp01: 44081166-44088711 Prunus persica
Prupe.1G539400 1.0kb downstream 1.0kb downstream 1000 false Pp01: 44081166-44082165 Prunus persica
Prupe.1G539400 2.0kb upstream 2.0kb upstream 8546 true Pp01: 44082166-44090711 Prunus persica
Prupe.1G539400 2.0kb upstream 2.0kb upstream 2000 false Pp01: 44088712-44090711 Prunus persica
Prupe.1G539400 2.0kb downstream 2.0kb downstream 8546 true Pp01: 44080166-44088711 Prunus persica
Prupe.1G539400 2.0kb downstream 2.0kb downstream 2000 false Pp01: 44080166-44082165 Prunus persica
Prupe.1G539400 5.0kb upstream 5.0kb upstream 11546 true Pp01: 44082166-44093711 Prunus persica
Prupe.1G539400 5.0kb upstream 5.0kb upstream 5000 false Pp01: 44088712-44093711 Prunus persica
Prupe.1G539400 5.0kb downstream 5.0kb downstream 11546 true Pp01: 44077166-44088711 Prunus persica
Prupe.1G539400 5.0kb downstream 5.0kb downstream 5000 false Pp01: 44077166-44082165 Prunus persica
Prupe.1G539400 10.0kb upstream 10.0kb upstream 16546 true Pp01: 44082166-44098711 Prunus persica
Prupe.1G539400 10.0kb upstream 10.0kb upstream 10000 false Pp01: 44088712-44098711 Prunus persica
Prupe.1G539400 10.0kb downstream 10.0kb downstream 16546 true Pp01: 44072166-44088711 Prunus persica
Prupe.1G539400 10.0kb downstream 10.0kb downstream 10000 false Pp01: 44072166-44082165 Prunus persica

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314119 5265 Fabidae View MSA
124064979 5270 Rosid View MSA
123747223 5271 Pentapetalae View MSA
122789073 5272 Eudicot View MSA
122045639 5273 Angiosperm View MSA
121346714 5274 Embryophyte View MSA
123424879 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain