Protein Domain : IPR005905

Type:  Family Name:  D-alanine--D-alanine ligase
Description:  D-alanine--D-alanine ligase () is a bacterial enzyme involved in cell-wall biosynthesis. It participates in forming UDP-N-acetylmuramoyl pentapeptide, the peptidoglycan precursor. These enzymes are proteins of 300 to 360 amino acids containing many conserved regions. The N-terminal Gly-rich region could be involved in ATP-binding.This family of enzymes represent chromosomal versions of species not specifically resistant to glycopeptide antibiotics such as vancomycin. The mechanism of glycopeptide antibiotic resistance involves the production of D-alanine-D-lactate (VanA and VanB families) or D-alanine-D-serine (VanC). This model attempts to exclude the VanA/VanB and VanC subfamilies while capturing most other D-Ala-D-Ala ligases above the trusted cut-off. However, changes in small numbers of amino acids, as demonstrated crystallographically, can alter specificity. In chlamydial species, this enzyme is found as a fusion protein with UDP-N-acetylmuramate--alanine ligase. Short Name:  D_ala_D_ala

0 Child Features

4 Contains

DB identifier Type Name
IPR011095 Domain D-alanine--D-alanine ligase, C-terminal
IPR011127 Domain D-alanine--D-alanine ligase, N-terminal domain
IPR013816 Domain ATP-grasp fold, subdomain 2
IPR000291 Conserved_site D-alanine--D-alanine ligase/VANA/B/C, conserved site

4 Cross Referencess

Identifier
PTHR23132
PIRSF039102
TIGR01205
MF_00047

0 Found In

2 GO Annotations

GO Term Gene Name
GO:0008716 IPR005905
GO:0005737 IPR005905

2 Ontology Annotations

GO Term Gene Name
GO:0008716 IPR005905
GO:0005737 IPR005905

0 Parent Features

594 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
180525 D8SKF8 PAC:15414053 Selaginella moellendorffii 857  
evm.TU.contig_34215.1 PAC:16430420 Carica papaya 430  
evm.model.supercontig_33.102 PAC:16417545 Carica papaya 629  
28092.m000080 B9T6C3 PAC:16799902 Ricinus communis 1000  
Cucsa.176830.3 PAC:16966939 Cucumis sativus 878  
Cucsa.176830.1 A0A0A0LCN0 PAC:16966937 Cucumis sativus 960  
Cucsa.176830.2 A0A0A0LCN0 PAC:16966938 Cucumis sativus 960  
orange1.1g004630m PAC:18131136 Citrus sinensis 741  
orange1.1g002207m PAC:18131135 Citrus sinensis 953  
AT3G08840.2 F4IYI8 PAC:19664241 Arabidopsis thaliana 937  
AT3G08840.3 F4IYI9 PAC:19664242 Arabidopsis thaliana 845  
AT3G08840.1 Q8GXA2 PAC:19664243 Arabidopsis thaliana 519  
Thhalv10020004m V4M9W4 PAC:20181620 Eutrema salsugineum 943  
Ciclev10011082m PAC:20796822 Citrus clementina 828  
Lus10012211 PAC:23172673 Linum usitatissimum 1078  
Lus10001259 PAC:23166952 Linum usitatissimum 865  
Potri.006G106000.1 A0A2K2A029 PAC:27006611 Populus trichocarpa 947  
Gorai.012G119800.2 A0A0D2V4I0 PAC:26828966 Gossypium raimondii 953  
Gorai.012G119800.1 A0A0D2V4I0 PAC:26828965 Gossypium raimondii 953  
61418 I0Z3F8 PAC:27390274 Coccomyxa subellipsoidea C-169 1620  
56342 I0YU26 PAC:27392174 Coccomyxa subellipsoidea C-169 506  
175571 C1MLG7 PAC:27342466 Micromonas pusilla CCMP1545 918  
Thecc1EG021565t4 A0A061EQ97 PAC:27423342 Theobroma cacao 748  
Thecc1EG021565t2 A0A061EXN2 PAC:27423341 Theobroma cacao 804  
Thecc1EG021565t3 A0A061EPP7 PAC:27423340 Theobroma cacao 918  
Thecc1EG021565t1 A0A061EQS3 PAC:27423339 Theobroma cacao 958  
Migut.J00081.1.p PAC:28941828 Mimulus guttatus 955  
Araha.11756s0419.1.p PAC:28856612 Arabidopsis halleri 305  
Araha.25299s0012.1.p PAC:28841160 Arabidopsis halleri 936  
Cagra.2991s0010.1.p PAC:28900197 Capsella grandiflora 935  

0 Publications