Protein Domain : IPR015130

Type:  Domain Name:  D-Lysine 5,6-aminomutase alpha subunit
Description:  This domain is found in proteins involved in the 1,2 rearrangement of the terminal amino group of DL-lysine and of L-beta-lysine, using adenosylcobalamin (AdoCbl) and pyridoxal-5'-phosphate as cofactors. The structure is predominantly a PLP-binding TIM barrel domain, with several additional alpha-helices and beta-strands at the N and C termini. These helices and strands form an intertwined accessory clamp structure that wraps around the sides of the TIM barrel and extends up toward the Ado ligand of the Cbl cofactor, providing most of the interactions observed between the protein and the Ado ligand of the Cbl, suggesting that its role is mainly in stabilising AdoCbl in the precatalytic resting state. Short Name:  Lys-AminoMut_A

0 Child Features

0 Contains

2 Cross Referencess

Identifier
PF09043
G3DSA:3.20.20.440

0 Found In

0 GO Annotation

0 Ontology Annotations

0 Parent Features

85 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
406889 D8R396 PAC:15419191 Selaginella moellendorffii 199  
29657.m000462 B9SUS8 PAC:16804961 Ricinus communis 228  
Cucsa.149870.2 PAC:16964353 Cucumis sativus 158  
62859 C1FJU7 PAC:27399578 Micromonas sp RCC299 373  
Migut.A00548.1.p PAC:28939416 Mimulus guttatus 217  
Glyma.19G096700.1.p I1N7V7 PAC:30513699 Glycine max 522  
Medtr0001s0190.1 A0A072TLL4 PAC:31084627 Medicago truncatula 102  
evm_27.model.AmTr_v1.0_scaffold00146.24 W1PB51 PAC:31574925 Amborella trichopoda 54  
GSMUA_Achr4P13920_001 PAC:32297464 Musa acuminata 365  
Pahal.G00698.3 A0A2S3I7U8 PAC:32519784 Panicum hallii 300  
Pp3c7_18930V3.2.p A0A2K1KC75 PAC:32926325 Physcomitrium patens 288  
Pp3c7_18930V3.1.p A0A2K1KC75 PAC:32926324 Physcomitrium patens 288  
Pp3c11_14300V3.1.p A0A2K1JUP7 PAC:32958600 Physcomitrium patens 187  
Pp3c11_14300V3.6.p PAC:32958605 Physcomitrium patens 172  
Pp3c11_14300V3.7.p A0A2K1JUP7 PAC:32958603 Physcomitrium patens 187  
Pp3c11_14300V3.5.p PAC:32958604 Physcomitrium patens 172  
Pp3c11_14300V3.3.p A0A2K1JUP7 PAC:32958602 Physcomitrium patens 187  
Pp3c11_14300V3.2.p A0A2K1JUP7 PAC:32958601 Physcomitrium patens 187  
Dusal.0164s00015.1.p PAC:33198388 Dunaliella salina 219  
Kaladp0022s0037.1.p PAC:35759860 Kalanchoe fedtschenkoi 138  
DCAR_023232 PAC:36082748 Daucus carota 224  
evm.model.Scaffold_523.79 PAC:37843261 Coffea arabica 328  
HORVU2Hr1G019930.3 PAC:38368991 Hordeum vulgare 141  
Vigun01g073700.1.p PAC:39049329 Vigna unguiculata 514  
Vigun01g073700.2.p PAC:39049330 Vigna unguiculata 514  
Vigun01g073700.3.p PAC:39049331 Vigna unguiculata 514  
Myper.0045s0058.1.p PAC:39127257 Myagrum perfoliatum 138  
Alyli.0115s0008.1.p PAC:39165430 Alyssum linifolium 387  
Alyli.0071s0061.1.p PAC:39139805 Alyssum linifolium 387  
Thlar.0017s0285.1.p PAC:39538202 Thlaspi arvense 499  

0 Publications