Gene : GSMUA_Achr1G01610_001 M. acuminata v1
Defline:  (1 of 3) PTHR23163:SF3 - E3 UBIQUITIN-PROTEIN LIGASE BRE1-LIKE 1 Genomic Order:  161
Name:  ? GSMUA_Achr1G01610_001 Secondary Identifier:  ? PAC:32312413
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Macuminata PWY-7511 Musa acuminata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
GSMUA_Achr1G01610_001 0.5kb upstream 0.5kb upstream 11016 true chr1: 1328038-1339053 Musa acuminata
GSMUA_Achr1G01610_001 0.5kb upstream 0.5kb upstream 500 false chr1: 1328038-1328537 Musa acuminata
GSMUA_Achr1G01610_001 0.5kb downstream 0.5kb downstream 11016 true chr1: 1328538-1339553 Musa acuminata
GSMUA_Achr1G01610_001 0.5kb downstream 0.5kb downstream 500 false chr1: 1339054-1339553 Musa acuminata
GSMUA_Achr1G01610_001 1.0kb upstream 1.0kb upstream 11516 true chr1: 1327538-1339053 Musa acuminata
GSMUA_Achr1G01610_001 1.0kb upstream 1.0kb upstream 1000 false chr1: 1327538-1328537 Musa acuminata
GSMUA_Achr1G01610_001 1.0kb downstream 1.0kb downstream 11516 true chr1: 1328538-1340053 Musa acuminata
GSMUA_Achr1G01610_001 1.0kb downstream 1.0kb downstream 1000 false chr1: 1339054-1340053 Musa acuminata
GSMUA_Achr1G01610_001 2.0kb upstream 2.0kb upstream 12516 true chr1: 1326538-1339053 Musa acuminata
GSMUA_Achr1G01610_001 2.0kb upstream 2.0kb upstream 2000 false chr1: 1326538-1328537 Musa acuminata
GSMUA_Achr1G01610_001 2.0kb downstream 2.0kb downstream 12516 true chr1: 1328538-1341053 Musa acuminata
GSMUA_Achr1G01610_001 2.0kb downstream 2.0kb downstream 2000 false chr1: 1339054-1341053 Musa acuminata
GSMUA_Achr1G01610_001 5.0kb upstream 5.0kb upstream 15516 true chr1: 1323538-1339053 Musa acuminata
GSMUA_Achr1G01610_001 5.0kb upstream 5.0kb upstream 5000 false chr1: 1323538-1328537 Musa acuminata
GSMUA_Achr1G01610_001 5.0kb downstream 5.0kb downstream 15516 true chr1: 1328538-1344053 Musa acuminata
GSMUA_Achr1G01610_001 5.0kb downstream 5.0kb downstream 5000 false chr1: 1339054-1344053 Musa acuminata
GSMUA_Achr1G01610_001 10.0kb upstream 10.0kb upstream 20516 true chr1: 1318538-1339053 Musa acuminata
GSMUA_Achr1G01610_001 10.0kb upstream 10.0kb upstream 10000 false chr1: 1318538-1328537 Musa acuminata
GSMUA_Achr1G01610_001 10.0kb downstream 10.0kb downstream 20516 true chr1: 1328538-1349053 Musa acuminata
GSMUA_Achr1G01610_001 10.0kb downstream 10.0kb downstream 10000 false chr1: 1339054-1349053 Musa acuminata

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122042098 5273 Angiosperm View MSA
121349326 5274 Embryophyte View MSA
123423997 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain