Gene : GSMUA_Achr1G25290_001 M. acuminata v1

Defline:  (1 of 2) PTHR10791//PTHR10791:SF23 - RAG1-ACTIVATING PROTEIN 1 Genomic Order:  2530
Name:  ? GSMUA_Achr1G25290_001 Secondary Identifier:  ? PAC:32313134

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
GSMUA_Achr1G25290_001 0.5kb upstream 0.5kb upstream 4655 true chr1: 19672438-19677092 Musa acuminata
GSMUA_Achr1G25290_001 0.5kb upstream 0.5kb upstream 500 false chr1: 19672438-19672937 Musa acuminata
GSMUA_Achr1G25290_001 0.5kb downstream 0.5kb downstream 4655 true chr1: 19672938-19677592 Musa acuminata
GSMUA_Achr1G25290_001 0.5kb downstream 0.5kb downstream 500 false chr1: 19677093-19677592 Musa acuminata
GSMUA_Achr1G25290_001 1.0kb upstream 1.0kb upstream 5155 true chr1: 19671938-19677092 Musa acuminata
GSMUA_Achr1G25290_001 1.0kb upstream 1.0kb upstream 1000 false chr1: 19671938-19672937 Musa acuminata
GSMUA_Achr1G25290_001 1.0kb downstream 1.0kb downstream 5155 true chr1: 19672938-19678092 Musa acuminata
GSMUA_Achr1G25290_001 1.0kb downstream 1.0kb downstream 1000 false chr1: 19677093-19678092 Musa acuminata
GSMUA_Achr1G25290_001 2.0kb upstream 2.0kb upstream 6155 true chr1: 19670938-19677092 Musa acuminata
GSMUA_Achr1G25290_001 2.0kb upstream 2.0kb upstream 2000 false chr1: 19670938-19672937 Musa acuminata
GSMUA_Achr1G25290_001 2.0kb downstream 2.0kb downstream 6155 true chr1: 19672938-19679092 Musa acuminata
GSMUA_Achr1G25290_001 2.0kb downstream 2.0kb downstream 2000 false chr1: 19677093-19679092 Musa acuminata
GSMUA_Achr1G25290_001 5.0kb upstream 5.0kb upstream 9155 true chr1: 19667938-19677092 Musa acuminata
GSMUA_Achr1G25290_001 5.0kb upstream 5.0kb upstream 5000 false chr1: 19667938-19672937 Musa acuminata
GSMUA_Achr1G25290_001 5.0kb downstream 5.0kb downstream 9155 true chr1: 19672938-19682092 Musa acuminata
GSMUA_Achr1G25290_001 5.0kb downstream 5.0kb downstream 5000 false chr1: 19677093-19682092 Musa acuminata
GSMUA_Achr1G25290_001 10.0kb upstream 10.0kb upstream 14155 true chr1: 19662938-19677092 Musa acuminata
GSMUA_Achr1G25290_001 10.0kb upstream 10.0kb upstream 10000 false chr1: 19662938-19672937 Musa acuminata
GSMUA_Achr1G25290_001 10.0kb downstream 10.0kb downstream 14155 true chr1: 19672938-19687092 Musa acuminata
GSMUA_Achr1G25290_001 10.0kb downstream 10.0kb downstream 10000 false chr1: 19677093-19687092 Musa acuminata

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048091 5273 Angiosperm View MSA
121310847 5274 Embryophyte View MSA
123348232 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain