Gene : GSMUA_Achr2G20910_001 M. acuminata v1
Defline:  (1 of 3) 4.2.1.33 - 3-isopropylmalate dehydratase / Isopropylmalate isomerase Genomic Order:  2091
Name:  ? GSMUA_Achr2G20910_001 Secondary Identifier:  ? PAC:32305482
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Macuminata BRANCHED-CHAIN-AA-SYN-PWY Musa acuminata pathologic  
Macuminata LEUSYN-PWY Musa acuminata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
GSMUA_Achr2G20910_001 0.5kb upstream 0.5kb upstream 10216 true chr2: 20584259-20594474 Musa acuminata
GSMUA_Achr2G20910_001 0.5kb upstream 0.5kb upstream 500 false chr2: 20593975-20594474 Musa acuminata
GSMUA_Achr2G20910_001 0.5kb downstream 0.5kb downstream 10216 true chr2: 20583759-20593974 Musa acuminata
GSMUA_Achr2G20910_001 0.5kb downstream 0.5kb downstream 500 false chr2: 20583759-20584258 Musa acuminata
GSMUA_Achr2G20910_001 1.0kb upstream 1.0kb upstream 10716 true chr2: 20584259-20594974 Musa acuminata
GSMUA_Achr2G20910_001 1.0kb upstream 1.0kb upstream 1000 false chr2: 20593975-20594974 Musa acuminata
GSMUA_Achr2G20910_001 1.0kb downstream 1.0kb downstream 10716 true chr2: 20583259-20593974 Musa acuminata
GSMUA_Achr2G20910_001 1.0kb downstream 1.0kb downstream 1000 false chr2: 20583259-20584258 Musa acuminata
GSMUA_Achr2G20910_001 2.0kb upstream 2.0kb upstream 11716 true chr2: 20584259-20595974 Musa acuminata
GSMUA_Achr2G20910_001 2.0kb upstream 2.0kb upstream 2000 false chr2: 20593975-20595974 Musa acuminata
GSMUA_Achr2G20910_001 2.0kb downstream 2.0kb downstream 11716 true chr2: 20582259-20593974 Musa acuminata
GSMUA_Achr2G20910_001 2.0kb downstream 2.0kb downstream 2000 false chr2: 20582259-20584258 Musa acuminata
GSMUA_Achr2G20910_001 5.0kb upstream 5.0kb upstream 14716 true chr2: 20584259-20598974 Musa acuminata
GSMUA_Achr2G20910_001 5.0kb upstream 5.0kb upstream 5000 false chr2: 20593975-20598974 Musa acuminata
GSMUA_Achr2G20910_001 5.0kb downstream 5.0kb downstream 14716 true chr2: 20579259-20593974 Musa acuminata
GSMUA_Achr2G20910_001 5.0kb downstream 5.0kb downstream 5000 false chr2: 20579259-20584258 Musa acuminata
GSMUA_Achr2G20910_001 10.0kb upstream 10.0kb upstream 19716 true chr2: 20584259-20603974 Musa acuminata
GSMUA_Achr2G20910_001 10.0kb upstream 10.0kb upstream 10000 false chr2: 20593975-20603974 Musa acuminata
GSMUA_Achr2G20910_001 10.0kb downstream 10.0kb downstream 19716 true chr2: 20574259-20593974 Musa acuminata
GSMUA_Achr2G20910_001 10.0kb downstream 10.0kb downstream 10000 false chr2: 20574259-20584258 Musa acuminata

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122047334 5273 Angiosperm View MSA
121347218 5274 Embryophyte View MSA
123428745 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain