Gene : GSMUA_Achr2G12420_001 M. acuminata v1

Defline:  (1 of 4) PTHR34798:SF2 - PROTEIN TIME FOR COFFEE Genomic Order:  1242
Name:  ? GSMUA_Achr2G12420_001 Secondary Identifier:  ? PAC:32304956

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
GSMUA_Achr2G12420_001 0.5kb upstream 0.5kb upstream 6543 true chr2: 14881284-14887826 Musa acuminata
GSMUA_Achr2G12420_001 0.5kb upstream 0.5kb upstream 500 false chr2: 14887327-14887826 Musa acuminata
GSMUA_Achr2G12420_001 0.5kb downstream 0.5kb downstream 6543 true chr2: 14880784-14887326 Musa acuminata
GSMUA_Achr2G12420_001 0.5kb downstream 0.5kb downstream 500 false chr2: 14880784-14881283 Musa acuminata
GSMUA_Achr2G12420_001 1.0kb upstream 1.0kb upstream 7043 true chr2: 14881284-14888326 Musa acuminata
GSMUA_Achr2G12420_001 1.0kb upstream 1.0kb upstream 1000 false chr2: 14887327-14888326 Musa acuminata
GSMUA_Achr2G12420_001 1.0kb downstream 1.0kb downstream 7043 true chr2: 14880284-14887326 Musa acuminata
GSMUA_Achr2G12420_001 1.0kb downstream 1.0kb downstream 1000 false chr2: 14880284-14881283 Musa acuminata
GSMUA_Achr2G12420_001 2.0kb upstream 2.0kb upstream 8043 true chr2: 14881284-14889326 Musa acuminata
GSMUA_Achr2G12420_001 2.0kb upstream 2.0kb upstream 2000 false chr2: 14887327-14889326 Musa acuminata
GSMUA_Achr2G12420_001 2.0kb downstream 2.0kb downstream 8043 true chr2: 14879284-14887326 Musa acuminata
GSMUA_Achr2G12420_001 2.0kb downstream 2.0kb downstream 2000 false chr2: 14879284-14881283 Musa acuminata
GSMUA_Achr2G12420_001 5.0kb upstream 5.0kb upstream 11043 true chr2: 14881284-14892326 Musa acuminata
GSMUA_Achr2G12420_001 5.0kb upstream 5.0kb upstream 5000 false chr2: 14887327-14892326 Musa acuminata
GSMUA_Achr2G12420_001 5.0kb downstream 5.0kb downstream 11043 true chr2: 14876284-14887326 Musa acuminata
GSMUA_Achr2G12420_001 5.0kb downstream 5.0kb downstream 5000 false chr2: 14876284-14881283 Musa acuminata
GSMUA_Achr2G12420_001 10.0kb upstream 10.0kb upstream 16043 true chr2: 14881284-14897326 Musa acuminata
GSMUA_Achr2G12420_001 10.0kb upstream 10.0kb upstream 10000 false chr2: 14887327-14897326 Musa acuminata
GSMUA_Achr2G12420_001 10.0kb downstream 10.0kb downstream 16043 true chr2: 14871284-14887326 Musa acuminata
GSMUA_Achr2G12420_001 10.0kb downstream 10.0kb downstream 10000 false chr2: 14871284-14881283 Musa acuminata

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122049796 5273 Angiosperm View MSA
121350697 5274 Embryophyte View MSA
123381850 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain