Gene : GSMUA_Achr3G05680_001 M. acuminata v1

Defline:  (1 of 8) KOG1397 - Ca2+/H+ antiporter VCX1 and related proteins Genomic Order:  568
Name:  ? GSMUA_Achr3G05680_001 Secondary Identifier:  ? PAC:32293039

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
GSMUA_Achr3G05680_001 0.5kb upstream 0.5kb upstream 8632 true chr3: 3792938-3801569 Musa acuminata
GSMUA_Achr3G05680_001 0.5kb upstream 0.5kb upstream 500 false chr3: 3792938-3793437 Musa acuminata
GSMUA_Achr3G05680_001 0.5kb downstream 0.5kb downstream 8632 true chr3: 3793438-3802069 Musa acuminata
GSMUA_Achr3G05680_001 0.5kb downstream 0.5kb downstream 500 false chr3: 3801570-3802069 Musa acuminata
GSMUA_Achr3G05680_001 1.0kb upstream 1.0kb upstream 9132 true chr3: 3792438-3801569 Musa acuminata
GSMUA_Achr3G05680_001 1.0kb upstream 1.0kb upstream 1000 false chr3: 3792438-3793437 Musa acuminata
GSMUA_Achr3G05680_001 1.0kb downstream 1.0kb downstream 9132 true chr3: 3793438-3802569 Musa acuminata
GSMUA_Achr3G05680_001 1.0kb downstream 1.0kb downstream 1000 false chr3: 3801570-3802569 Musa acuminata
GSMUA_Achr3G05680_001 2.0kb upstream 2.0kb upstream 10132 true chr3: 3791438-3801569 Musa acuminata
GSMUA_Achr3G05680_001 2.0kb upstream 2.0kb upstream 2000 false chr3: 3791438-3793437 Musa acuminata
GSMUA_Achr3G05680_001 2.0kb downstream 2.0kb downstream 10132 true chr3: 3793438-3803569 Musa acuminata
GSMUA_Achr3G05680_001 2.0kb downstream 2.0kb downstream 2000 false chr3: 3801570-3803569 Musa acuminata
GSMUA_Achr3G05680_001 5.0kb upstream 5.0kb upstream 13132 true chr3: 3788438-3801569 Musa acuminata
GSMUA_Achr3G05680_001 5.0kb upstream 5.0kb upstream 5000 false chr3: 3788438-3793437 Musa acuminata
GSMUA_Achr3G05680_001 5.0kb downstream 5.0kb downstream 13132 true chr3: 3793438-3806569 Musa acuminata
GSMUA_Achr3G05680_001 5.0kb downstream 5.0kb downstream 5000 false chr3: 3801570-3806569 Musa acuminata
GSMUA_Achr3G05680_001 10.0kb upstream 10.0kb upstream 18132 true chr3: 3783438-3801569 Musa acuminata
GSMUA_Achr3G05680_001 10.0kb upstream 10.0kb upstream 10000 false chr3: 3783438-3793437 Musa acuminata
GSMUA_Achr3G05680_001 10.0kb downstream 10.0kb downstream 18132 true chr3: 3793438-3811569 Musa acuminata
GSMUA_Achr3G05680_001 10.0kb downstream 10.0kb downstream 10000 false chr3: 3801570-3811569 Musa acuminata

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045212 5273 Angiosperm View MSA
121347037 5274 Embryophyte View MSA
123427763 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain