Gene : GSMUA_Achr3G13020_001 M. acuminata v1
Defline:  (1 of 24) PF05627 - Cleavage site for pathogenic type III effector avirulence factor Avr (AvrRpt-cleavage) Genomic Order:  1301
Name:  ? GSMUA_Achr3G13020_001 Secondary Identifier:  ? PAC:32291788
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
GSMUA_Achr3G13020_001 0.5kb upstream 0.5kb upstream 5414 true chr3: 9574035-9579448 Musa acuminata
GSMUA_Achr3G13020_001 0.5kb upstream 0.5kb upstream 500 false chr3: 9574035-9574534 Musa acuminata
GSMUA_Achr3G13020_001 0.5kb downstream 0.5kb downstream 5414 true chr3: 9574535-9579948 Musa acuminata
GSMUA_Achr3G13020_001 0.5kb downstream 0.5kb downstream 500 false chr3: 9579449-9579948 Musa acuminata
GSMUA_Achr3G13020_001 1.0kb upstream 1.0kb upstream 5914 true chr3: 9573535-9579448 Musa acuminata
GSMUA_Achr3G13020_001 1.0kb upstream 1.0kb upstream 1000 false chr3: 9573535-9574534 Musa acuminata
GSMUA_Achr3G13020_001 1.0kb downstream 1.0kb downstream 5914 true chr3: 9574535-9580448 Musa acuminata
GSMUA_Achr3G13020_001 1.0kb downstream 1.0kb downstream 1000 false chr3: 9579449-9580448 Musa acuminata
GSMUA_Achr3G13020_001 2.0kb upstream 2.0kb upstream 6914 true chr3: 9572535-9579448 Musa acuminata
GSMUA_Achr3G13020_001 2.0kb upstream 2.0kb upstream 2000 false chr3: 9572535-9574534 Musa acuminata
GSMUA_Achr3G13020_001 2.0kb downstream 2.0kb downstream 6914 true chr3: 9574535-9581448 Musa acuminata
GSMUA_Achr3G13020_001 2.0kb downstream 2.0kb downstream 2000 false chr3: 9579449-9581448 Musa acuminata
GSMUA_Achr3G13020_001 5.0kb upstream 5.0kb upstream 9914 true chr3: 9569535-9579448 Musa acuminata
GSMUA_Achr3G13020_001 5.0kb upstream 5.0kb upstream 5000 false chr3: 9569535-9574534 Musa acuminata
GSMUA_Achr3G13020_001 5.0kb downstream 5.0kb downstream 9914 true chr3: 9574535-9584448 Musa acuminata
GSMUA_Achr3G13020_001 5.0kb downstream 5.0kb downstream 5000 false chr3: 9579449-9584448 Musa acuminata
GSMUA_Achr3G13020_001 10.0kb upstream 10.0kb upstream 14914 true chr3: 9564535-9579448 Musa acuminata
GSMUA_Achr3G13020_001 10.0kb upstream 10.0kb upstream 10000 false chr3: 9564535-9574534 Musa acuminata
GSMUA_Achr3G13020_001 10.0kb downstream 10.0kb downstream 14914 true chr3: 9574535-9589448 Musa acuminata
GSMUA_Achr3G13020_001 10.0kb downstream 10.0kb downstream 10000 false chr3: 9579449-9589448 Musa acuminata

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048165 5273 Angiosperm View MSA
121344169 5274 Embryophyte View MSA
123379991 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain