Gene : GSMUA_Achr3G21980_001 M. acuminata v1
Defline:  (1 of 3) PF02900 - Catalytic LigB subunit of aromatic ring-opening dioxygenase (LigB) Genomic Order:  2197
Name:  ? GSMUA_Achr3G21980_001 Secondary Identifier:  ? PAC:32292953
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
GSMUA_Achr3G21980_001 0.5kb upstream 0.5kb upstream 3423 true chr3: 22898525-22901947 Musa acuminata
GSMUA_Achr3G21980_001 0.5kb upstream 0.5kb upstream 500 false chr3: 22901448-22901947 Musa acuminata
GSMUA_Achr3G21980_001 0.5kb downstream 0.5kb downstream 3423 true chr3: 22898025-22901447 Musa acuminata
GSMUA_Achr3G21980_001 0.5kb downstream 0.5kb downstream 500 false chr3: 22898025-22898524 Musa acuminata
GSMUA_Achr3G21980_001 1.0kb upstream 1.0kb upstream 3923 true chr3: 22898525-22902447 Musa acuminata
GSMUA_Achr3G21980_001 1.0kb upstream 1.0kb upstream 1000 false chr3: 22901448-22902447 Musa acuminata
GSMUA_Achr3G21980_001 1.0kb downstream 1.0kb downstream 3923 true chr3: 22897525-22901447 Musa acuminata
GSMUA_Achr3G21980_001 1.0kb downstream 1.0kb downstream 1000 false chr3: 22897525-22898524 Musa acuminata
GSMUA_Achr3G21980_001 2.0kb upstream 2.0kb upstream 4923 true chr3: 22898525-22903447 Musa acuminata
GSMUA_Achr3G21980_001 2.0kb upstream 2.0kb upstream 2000 false chr3: 22901448-22903447 Musa acuminata
GSMUA_Achr3G21980_001 2.0kb downstream 2.0kb downstream 4923 true chr3: 22896525-22901447 Musa acuminata
GSMUA_Achr3G21980_001 2.0kb downstream 2.0kb downstream 2000 false chr3: 22896525-22898524 Musa acuminata
GSMUA_Achr3G21980_001 5.0kb upstream 5.0kb upstream 7923 true chr3: 22898525-22906447 Musa acuminata
GSMUA_Achr3G21980_001 5.0kb upstream 5.0kb upstream 5000 false chr3: 22901448-22906447 Musa acuminata
GSMUA_Achr3G21980_001 5.0kb downstream 5.0kb downstream 7923 true chr3: 22893525-22901447 Musa acuminata
GSMUA_Achr3G21980_001 5.0kb downstream 5.0kb downstream 5000 false chr3: 22893525-22898524 Musa acuminata
GSMUA_Achr3G21980_001 10.0kb upstream 10.0kb upstream 12923 true chr3: 22898525-22911447 Musa acuminata
GSMUA_Achr3G21980_001 10.0kb upstream 10.0kb upstream 10000 false chr3: 22901448-22911447 Musa acuminata
GSMUA_Achr3G21980_001 10.0kb downstream 10.0kb downstream 12923 true chr3: 22888525-22901447 Musa acuminata
GSMUA_Achr3G21980_001 10.0kb downstream 10.0kb downstream 10000 false chr3: 22888525-22898524 Musa acuminata

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122046323 5273 Angiosperm View MSA
121350065 5274 Embryophyte View MSA
123426386 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain