Gene : GSMUA_Achr4G23800_001 M. acuminata v1
Defline:  (1 of 2) PTHR12358//PTHR12358:SF42 - SPHINGOSINE KINASE Genomic Order:  2377
Name:  ? GSMUA_Achr4G23800_001 Secondary Identifier:  ? PAC:32299511
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Macuminata PWY-5129 Musa acuminata pathologic  
Macuminata PWY-6483 Musa acuminata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
GSMUA_Achr4G23800_001 0.5kb upstream 0.5kb upstream 7068 true chr4: 23800412-23807479 Musa acuminata
GSMUA_Achr4G23800_001 0.5kb upstream 0.5kb upstream 500 false chr4: 23806980-23807479 Musa acuminata
GSMUA_Achr4G23800_001 0.5kb downstream 0.5kb downstream 7068 true chr4: 23799912-23806979 Musa acuminata
GSMUA_Achr4G23800_001 0.5kb downstream 0.5kb downstream 500 false chr4: 23799912-23800411 Musa acuminata
GSMUA_Achr4G23800_001 1.0kb upstream 1.0kb upstream 7568 true chr4: 23800412-23807979 Musa acuminata
GSMUA_Achr4G23800_001 1.0kb upstream 1.0kb upstream 1000 false chr4: 23806980-23807979 Musa acuminata
GSMUA_Achr4G23800_001 1.0kb downstream 1.0kb downstream 7568 true chr4: 23799412-23806979 Musa acuminata
GSMUA_Achr4G23800_001 1.0kb downstream 1.0kb downstream 1000 false chr4: 23799412-23800411 Musa acuminata
GSMUA_Achr4G23800_001 2.0kb upstream 2.0kb upstream 8568 true chr4: 23800412-23808979 Musa acuminata
GSMUA_Achr4G23800_001 2.0kb upstream 2.0kb upstream 2000 false chr4: 23806980-23808979 Musa acuminata
GSMUA_Achr4G23800_001 2.0kb downstream 2.0kb downstream 8568 true chr4: 23798412-23806979 Musa acuminata
GSMUA_Achr4G23800_001 2.0kb downstream 2.0kb downstream 2000 false chr4: 23798412-23800411 Musa acuminata
GSMUA_Achr4G23800_001 5.0kb upstream 5.0kb upstream 11568 true chr4: 23800412-23811979 Musa acuminata
GSMUA_Achr4G23800_001 5.0kb upstream 5.0kb upstream 5000 false chr4: 23806980-23811979 Musa acuminata
GSMUA_Achr4G23800_001 5.0kb downstream 5.0kb downstream 11568 true chr4: 23795412-23806979 Musa acuminata
GSMUA_Achr4G23800_001 5.0kb downstream 5.0kb downstream 5000 false chr4: 23795412-23800411 Musa acuminata
GSMUA_Achr4G23800_001 10.0kb upstream 10.0kb upstream 16568 true chr4: 23800412-23816979 Musa acuminata
GSMUA_Achr4G23800_001 10.0kb upstream 10.0kb upstream 10000 false chr4: 23806980-23816979 Musa acuminata
GSMUA_Achr4G23800_001 10.0kb downstream 10.0kb downstream 16568 true chr4: 23790412-23806979 Musa acuminata
GSMUA_Achr4G23800_001 10.0kb downstream 10.0kb downstream 10000 false chr4: 23790412-23800411 Musa acuminata

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045440 5273 Angiosperm View MSA
121350923 5274 Embryophyte View MSA
123428396 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain