Gene : GSMUA_Achr6G21030_001 M. acuminata v1
Defline:  (1 of 2) PTHR34803:SF2 - PHOTOSYSTEM I REACTION CENTER SUBUNIT XI, CHLOROPLASTIC Genomic Order:  2102
Name:  ? GSMUA_Achr6G21030_001 Secondary Identifier:  ? PAC:32319867
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Macuminata PHOTOALL-PWY Musa acuminata pathologic  
Macuminata PWY-101 Musa acuminata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
GSMUA_Achr6G21030_001 0.5kb upstream 0.5kb upstream 1422 true chr6: 16313830-16315251 Musa acuminata
GSMUA_Achr6G21030_001 0.5kb upstream 0.5kb upstream 500 false chr6: 16314752-16315251 Musa acuminata
GSMUA_Achr6G21030_001 0.5kb downstream 0.5kb downstream 1422 true chr6: 16313330-16314751 Musa acuminata
GSMUA_Achr6G21030_001 0.5kb downstream 0.5kb downstream 500 false chr6: 16313330-16313829 Musa acuminata
GSMUA_Achr6G21030_001 1.0kb upstream 1.0kb upstream 1922 true chr6: 16313830-16315751 Musa acuminata
GSMUA_Achr6G21030_001 1.0kb upstream 1.0kb upstream 1000 false chr6: 16314752-16315751 Musa acuminata
GSMUA_Achr6G21030_001 1.0kb downstream 1.0kb downstream 1922 true chr6: 16312830-16314751 Musa acuminata
GSMUA_Achr6G21030_001 1.0kb downstream 1.0kb downstream 1000 false chr6: 16312830-16313829 Musa acuminata
GSMUA_Achr6G21030_001 2.0kb upstream 2.0kb upstream 2922 true chr6: 16313830-16316751 Musa acuminata
GSMUA_Achr6G21030_001 2.0kb upstream 2.0kb upstream 2000 false chr6: 16314752-16316751 Musa acuminata
GSMUA_Achr6G21030_001 2.0kb downstream 2.0kb downstream 2922 true chr6: 16311830-16314751 Musa acuminata
GSMUA_Achr6G21030_001 2.0kb downstream 2.0kb downstream 2000 false chr6: 16311830-16313829 Musa acuminata
GSMUA_Achr6G21030_001 5.0kb upstream 5.0kb upstream 5922 true chr6: 16313830-16319751 Musa acuminata
GSMUA_Achr6G21030_001 5.0kb upstream 5.0kb upstream 5000 false chr6: 16314752-16319751 Musa acuminata
GSMUA_Achr6G21030_001 5.0kb downstream 5.0kb downstream 5922 true chr6: 16308830-16314751 Musa acuminata
GSMUA_Achr6G21030_001 5.0kb downstream 5.0kb downstream 5000 false chr6: 16308830-16313829 Musa acuminata
GSMUA_Achr6G21030_001 10.0kb upstream 10.0kb upstream 10922 true chr6: 16313830-16324751 Musa acuminata
GSMUA_Achr6G21030_001 10.0kb upstream 10.0kb upstream 10000 false chr6: 16314752-16324751 Musa acuminata
GSMUA_Achr6G21030_001 10.0kb downstream 10.0kb downstream 10922 true chr6: 16303830-16314751 Musa acuminata
GSMUA_Achr6G21030_001 10.0kb downstream 10.0kb downstream 10000 false chr6: 16303830-16313829 Musa acuminata

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040995 5273 Angiosperm View MSA
121343870 5274 Embryophyte View MSA
123424325 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain