Gene : GSMUA_Achr7G12180_001 M. acuminata v1
Defline:  (1 of 1) PTHR11777:SF14 - ALANINE--TRNA LIGASE, CHLOROPLASTIC-RELATED Genomic Order:  1216
Name:  ? GSMUA_Achr7G12180_001 Secondary Identifier:  ? PAC:32300749
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Macuminata TRNA-CHARGING-PWY Musa acuminata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
GSMUA_Achr7G12180_001 0.5kb upstream 0.5kb upstream 9882 true chr7: 9716126-9726007 Musa acuminata
GSMUA_Achr7G12180_001 0.5kb upstream 0.5kb upstream 500 false chr7: 9716126-9716625 Musa acuminata
GSMUA_Achr7G12180_001 0.5kb downstream 0.5kb downstream 9882 true chr7: 9716626-9726507 Musa acuminata
GSMUA_Achr7G12180_001 0.5kb downstream 0.5kb downstream 500 false chr7: 9726008-9726507 Musa acuminata
GSMUA_Achr7G12180_001 1.0kb upstream 1.0kb upstream 10382 true chr7: 9715626-9726007 Musa acuminata
GSMUA_Achr7G12180_001 1.0kb upstream 1.0kb upstream 1000 false chr7: 9715626-9716625 Musa acuminata
GSMUA_Achr7G12180_001 1.0kb downstream 1.0kb downstream 10382 true chr7: 9716626-9727007 Musa acuminata
GSMUA_Achr7G12180_001 1.0kb downstream 1.0kb downstream 1000 false chr7: 9726008-9727007 Musa acuminata
GSMUA_Achr7G12180_001 2.0kb upstream 2.0kb upstream 11382 true chr7: 9714626-9726007 Musa acuminata
GSMUA_Achr7G12180_001 2.0kb upstream 2.0kb upstream 2000 false chr7: 9714626-9716625 Musa acuminata
GSMUA_Achr7G12180_001 2.0kb downstream 2.0kb downstream 11382 true chr7: 9716626-9728007 Musa acuminata
GSMUA_Achr7G12180_001 2.0kb downstream 2.0kb downstream 2000 false chr7: 9726008-9728007 Musa acuminata
GSMUA_Achr7G12180_001 5.0kb upstream 5.0kb upstream 14382 true chr7: 9711626-9726007 Musa acuminata
GSMUA_Achr7G12180_001 5.0kb upstream 5.0kb upstream 5000 false chr7: 9711626-9716625 Musa acuminata
GSMUA_Achr7G12180_001 5.0kb downstream 5.0kb downstream 14382 true chr7: 9716626-9731007 Musa acuminata
GSMUA_Achr7G12180_001 5.0kb downstream 5.0kb downstream 5000 false chr7: 9726008-9731007 Musa acuminata
GSMUA_Achr7G12180_001 10.0kb upstream 10.0kb upstream 19382 true chr7: 9706626-9726007 Musa acuminata
GSMUA_Achr7G12180_001 10.0kb upstream 10.0kb upstream 10000 false chr7: 9706626-9716625 Musa acuminata
GSMUA_Achr7G12180_001 10.0kb downstream 10.0kb downstream 19382 true chr7: 9716626-9736007 Musa acuminata
GSMUA_Achr7G12180_001 10.0kb downstream 10.0kb downstream 10000 false chr7: 9726008-9736007 Musa acuminata

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048095 5273 Angiosperm View MSA
121348703 5274 Embryophyte View MSA
123425032 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain