Gene : GSMUA_Achr11G07450_001 M. acuminata v1
Defline:  (1 of 2) PTHR31480:SF2 - PHYTOENE SYNTHASE, CHLOROPLASTIC Genomic Order:  744
Name:  ? GSMUA_Achr11G07450_001 Secondary Identifier:  ? PAC:32316878
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Macuminata CAROTENOID-PWY Musa acuminata pathologic  
Macuminata PWY-6475 Musa acuminata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
GSMUA_Achr11G07450_001 0.5kb upstream 0.5kb upstream 2282 true chr11: 5827293-5829574 Musa acuminata
GSMUA_Achr11G07450_001 0.5kb upstream 0.5kb upstream 500 false chr11: 5829075-5829574 Musa acuminata
GSMUA_Achr11G07450_001 0.5kb downstream 0.5kb downstream 2282 true chr11: 5826793-5829074 Musa acuminata
GSMUA_Achr11G07450_001 0.5kb downstream 0.5kb downstream 500 false chr11: 5826793-5827292 Musa acuminata
GSMUA_Achr11G07450_001 1.0kb upstream 1.0kb upstream 2782 true chr11: 5827293-5830074 Musa acuminata
GSMUA_Achr11G07450_001 1.0kb upstream 1.0kb upstream 1000 false chr11: 5829075-5830074 Musa acuminata
GSMUA_Achr11G07450_001 1.0kb downstream 1.0kb downstream 2782 true chr11: 5826293-5829074 Musa acuminata
GSMUA_Achr11G07450_001 1.0kb downstream 1.0kb downstream 1000 false chr11: 5826293-5827292 Musa acuminata
GSMUA_Achr11G07450_001 2.0kb upstream 2.0kb upstream 3782 true chr11: 5827293-5831074 Musa acuminata
GSMUA_Achr11G07450_001 2.0kb upstream 2.0kb upstream 2000 false chr11: 5829075-5831074 Musa acuminata
GSMUA_Achr11G07450_001 2.0kb downstream 2.0kb downstream 3782 true chr11: 5825293-5829074 Musa acuminata
GSMUA_Achr11G07450_001 2.0kb downstream 2.0kb downstream 2000 false chr11: 5825293-5827292 Musa acuminata
GSMUA_Achr11G07450_001 5.0kb upstream 5.0kb upstream 6782 true chr11: 5827293-5834074 Musa acuminata
GSMUA_Achr11G07450_001 5.0kb upstream 5.0kb upstream 5000 false chr11: 5829075-5834074 Musa acuminata
GSMUA_Achr11G07450_001 5.0kb downstream 5.0kb downstream 6782 true chr11: 5822293-5829074 Musa acuminata
GSMUA_Achr11G07450_001 5.0kb downstream 5.0kb downstream 5000 false chr11: 5822293-5827292 Musa acuminata
GSMUA_Achr11G07450_001 10.0kb upstream 10.0kb upstream 11782 true chr11: 5827293-5839074 Musa acuminata
GSMUA_Achr11G07450_001 10.0kb upstream 10.0kb upstream 10000 false chr11: 5829075-5839074 Musa acuminata
GSMUA_Achr11G07450_001 10.0kb downstream 10.0kb downstream 11782 true chr11: 5817293-5829074 Musa acuminata
GSMUA_Achr11G07450_001 10.0kb downstream 10.0kb downstream 10000 false chr11: 5817293-5827292 Musa acuminata

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041269 5273 Angiosperm View MSA
121345575 5274 Embryophyte View MSA
123426823 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain