Gene : GSMUA_Achr8G24580_001 M. acuminata v1
Defline:  (1 of 2) PTHR22763:SF50 - E3 UBIQUITIN-PROTEIN LIGASE AIP2 Genomic Order:  2459
Name:  ? GSMUA_Achr8G24580_001 Secondary Identifier:  ? PAC:32311846
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Macuminata PWY-7511 Musa acuminata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
GSMUA_Achr8G24580_001 0.5kb upstream 0.5kb upstream 5555 true chr8: 28728061-28733615 Musa acuminata
GSMUA_Achr8G24580_001 0.5kb upstream 0.5kb upstream 500 false chr8: 28728061-28728560 Musa acuminata
GSMUA_Achr8G24580_001 0.5kb downstream 0.5kb downstream 5555 true chr8: 28728561-28734115 Musa acuminata
GSMUA_Achr8G24580_001 0.5kb downstream 0.5kb downstream 500 false chr8: 28733616-28734115 Musa acuminata
GSMUA_Achr8G24580_001 1.0kb upstream 1.0kb upstream 6055 true chr8: 28727561-28733615 Musa acuminata
GSMUA_Achr8G24580_001 1.0kb upstream 1.0kb upstream 1000 false chr8: 28727561-28728560 Musa acuminata
GSMUA_Achr8G24580_001 1.0kb downstream 1.0kb downstream 6055 true chr8: 28728561-28734615 Musa acuminata
GSMUA_Achr8G24580_001 1.0kb downstream 1.0kb downstream 1000 false chr8: 28733616-28734615 Musa acuminata
GSMUA_Achr8G24580_001 2.0kb upstream 2.0kb upstream 7055 true chr8: 28726561-28733615 Musa acuminata
GSMUA_Achr8G24580_001 2.0kb upstream 2.0kb upstream 2000 false chr8: 28726561-28728560 Musa acuminata
GSMUA_Achr8G24580_001 2.0kb downstream 2.0kb downstream 7055 true chr8: 28728561-28735615 Musa acuminata
GSMUA_Achr8G24580_001 2.0kb downstream 2.0kb downstream 2000 false chr8: 28733616-28735615 Musa acuminata
GSMUA_Achr8G24580_001 5.0kb upstream 5.0kb upstream 10055 true chr8: 28723561-28733615 Musa acuminata
GSMUA_Achr8G24580_001 5.0kb upstream 5.0kb upstream 5000 false chr8: 28723561-28728560 Musa acuminata
GSMUA_Achr8G24580_001 5.0kb downstream 5.0kb downstream 10055 true chr8: 28728561-28738615 Musa acuminata
GSMUA_Achr8G24580_001 5.0kb downstream 5.0kb downstream 5000 false chr8: 28733616-28738615 Musa acuminata
GSMUA_Achr8G24580_001 10.0kb upstream 10.0kb upstream 15055 true chr8: 28718561-28733615 Musa acuminata
GSMUA_Achr8G24580_001 10.0kb upstream 10.0kb upstream 10000 false chr8: 28718561-28728560 Musa acuminata
GSMUA_Achr8G24580_001 10.0kb downstream 10.0kb downstream 15055 true chr8: 28728561-28743615 Musa acuminata
GSMUA_Achr8G24580_001 10.0kb downstream 10.0kb downstream 10000 false chr8: 28733616-28743615 Musa acuminata

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026169 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121350344 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain