Gene : GSMUA_Achr8G26670_001 M. acuminata v1
Defline:  (1 of 2) 5.2.1.13 - Prolycopene isomerase / CRTISO Genomic Order:  2668
Name:  ? GSMUA_Achr8G26670_001 Secondary Identifier:  ? PAC:32309416
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Macuminata CAROTENOID-PWY Musa acuminata pathologic  
Macuminata PWY-6475 Musa acuminata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
GSMUA_Achr8G26670_001 0.5kb upstream 0.5kb upstream 6495 true chr8: 30129587-30136081 Musa acuminata
GSMUA_Achr8G26670_001 0.5kb upstream 0.5kb upstream 500 false chr8: 30129587-30130086 Musa acuminata
GSMUA_Achr8G26670_001 0.5kb downstream 0.5kb downstream 6495 true chr8: 30130087-30136581 Musa acuminata
GSMUA_Achr8G26670_001 0.5kb downstream 0.5kb downstream 500 false chr8: 30136082-30136581 Musa acuminata
GSMUA_Achr8G26670_001 1.0kb upstream 1.0kb upstream 6995 true chr8: 30129087-30136081 Musa acuminata
GSMUA_Achr8G26670_001 1.0kb upstream 1.0kb upstream 1000 false chr8: 30129087-30130086 Musa acuminata
GSMUA_Achr8G26670_001 1.0kb downstream 1.0kb downstream 6995 true chr8: 30130087-30137081 Musa acuminata
GSMUA_Achr8G26670_001 1.0kb downstream 1.0kb downstream 1000 false chr8: 30136082-30137081 Musa acuminata
GSMUA_Achr8G26670_001 2.0kb upstream 2.0kb upstream 7995 true chr8: 30128087-30136081 Musa acuminata
GSMUA_Achr8G26670_001 2.0kb upstream 2.0kb upstream 2000 false chr8: 30128087-30130086 Musa acuminata
GSMUA_Achr8G26670_001 2.0kb downstream 2.0kb downstream 7995 true chr8: 30130087-30138081 Musa acuminata
GSMUA_Achr8G26670_001 2.0kb downstream 2.0kb downstream 2000 false chr8: 30136082-30138081 Musa acuminata
GSMUA_Achr8G26670_001 5.0kb upstream 5.0kb upstream 10995 true chr8: 30125087-30136081 Musa acuminata
GSMUA_Achr8G26670_001 5.0kb upstream 5.0kb upstream 5000 false chr8: 30125087-30130086 Musa acuminata
GSMUA_Achr8G26670_001 5.0kb downstream 5.0kb downstream 10995 true chr8: 30130087-30141081 Musa acuminata
GSMUA_Achr8G26670_001 5.0kb downstream 5.0kb downstream 5000 false chr8: 30136082-30141081 Musa acuminata
GSMUA_Achr8G26670_001 10.0kb upstream 10.0kb upstream 15995 true chr8: 30120087-30136081 Musa acuminata
GSMUA_Achr8G26670_001 10.0kb upstream 10.0kb upstream 10000 false chr8: 30120087-30130086 Musa acuminata
GSMUA_Achr8G26670_001 10.0kb downstream 10.0kb downstream 15995 true chr8: 30130087-30146081 Musa acuminata
GSMUA_Achr8G26670_001 10.0kb downstream 10.0kb downstream 10000 false chr8: 30136082-30146081 Musa acuminata

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026345 5273 Angiosperm View MSA
121345795 5274 Embryophyte View MSA
123425130 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain