Gene : GSMUA_Achr9G19170_001 M. acuminata v1
Defline:  (1 of 3) PTHR13789:SF249 - LYCOPENE BETA CYCLASE, CHLOROPLASTIC Genomic Order:  1918
Name:  ? GSMUA_Achr9G19170_001 Secondary Identifier:  ? PAC:32307144
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Macuminata CAROTENOID-PWY Musa acuminata pathologic  
Macuminata PWY-5943 Musa acuminata pathologic  
Macuminata PWY-5947 Musa acuminata pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
GSMUA_Achr9G19170_001 0.5kb upstream 0.5kb upstream 2121 true chr9: 18023916-18026036 Musa acuminata
GSMUA_Achr9G19170_001 0.5kb upstream 0.5kb upstream 500 false chr9: 18023916-18024415 Musa acuminata
GSMUA_Achr9G19170_001 0.5kb downstream 0.5kb downstream 2121 true chr9: 18024416-18026536 Musa acuminata
GSMUA_Achr9G19170_001 0.5kb downstream 0.5kb downstream 500 false chr9: 18026037-18026536 Musa acuminata
GSMUA_Achr9G19170_001 1.0kb upstream 1.0kb upstream 2621 true chr9: 18023416-18026036 Musa acuminata
GSMUA_Achr9G19170_001 1.0kb upstream 1.0kb upstream 1000 false chr9: 18023416-18024415 Musa acuminata
GSMUA_Achr9G19170_001 1.0kb downstream 1.0kb downstream 2621 true chr9: 18024416-18027036 Musa acuminata
GSMUA_Achr9G19170_001 1.0kb downstream 1.0kb downstream 1000 false chr9: 18026037-18027036 Musa acuminata
GSMUA_Achr9G19170_001 2.0kb upstream 2.0kb upstream 3621 true chr9: 18022416-18026036 Musa acuminata
GSMUA_Achr9G19170_001 2.0kb upstream 2.0kb upstream 2000 false chr9: 18022416-18024415 Musa acuminata
GSMUA_Achr9G19170_001 2.0kb downstream 2.0kb downstream 3621 true chr9: 18024416-18028036 Musa acuminata
GSMUA_Achr9G19170_001 2.0kb downstream 2.0kb downstream 2000 false chr9: 18026037-18028036 Musa acuminata
GSMUA_Achr9G19170_001 5.0kb upstream 5.0kb upstream 6621 true chr9: 18019416-18026036 Musa acuminata
GSMUA_Achr9G19170_001 5.0kb upstream 5.0kb upstream 5000 false chr9: 18019416-18024415 Musa acuminata
GSMUA_Achr9G19170_001 5.0kb downstream 5.0kb downstream 6621 true chr9: 18024416-18031036 Musa acuminata
GSMUA_Achr9G19170_001 5.0kb downstream 5.0kb downstream 5000 false chr9: 18026037-18031036 Musa acuminata
GSMUA_Achr9G19170_001 10.0kb upstream 10.0kb upstream 11621 true chr9: 18014416-18026036 Musa acuminata
GSMUA_Achr9G19170_001 10.0kb upstream 10.0kb upstream 10000 false chr9: 18014416-18024415 Musa acuminata
GSMUA_Achr9G19170_001 10.0kb downstream 10.0kb downstream 11621 true chr9: 18024416-18036036 Musa acuminata
GSMUA_Achr9G19170_001 10.0kb downstream 10.0kb downstream 10000 false chr9: 18026037-18036036 Musa acuminata

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122046204 5273 Angiosperm View MSA
121345644 5274 Embryophyte View MSA
123423874 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain