Protein Domain : IPR016095

Type:  Domain Name:  Ribosomal protein L1, 3-layer alpha/beta-sandwich
Description:  Ribosomal protein L1 is the largest protein from the large ribosomal subunit. The L1 protein contains two domains: 2-layer alpha/beta domain and a 3-layer alpha/beta domain (interrupts the first domain). This entry represents the 3-layer domain.It has been shown that the 2-layer alpha/beta-sandwich domain is for RNA binding. The 3-layer alpha/beta domain is to stabilise the L1-rRNA complex []. The 3-layer domain of ribosomal protein TthL1 hinders binding of intactprotein with RNA due to interdomain flexibility. As a result, the rate of complex formation with mRNA increases for the isolated domain I as compared with that for intact TthL1 []. Short Name:  Ribosomal_L1_3-a/b-sand

0 Child Features

0 Contains

1 Cross References

Identifier
G3DSA:3.40.50.790

2 Found Ins

DB identifier Type Name
IPR002143 Family Ribosomal protein L1
IPR005879 Family Ribosomal protein L1, mitochondrial

0 GO Annotation

0 Ontology Annotations

0 Parent Features

784 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
407841 D8R4Y0 PAC:15421926 Selaginella moellendorffii 1025  
evm.TU.contig_29343.2 PAC:16429687 Carica papaya 354  
evm.TU.contig_41904.1 PAC:16431669 Carica papaya 103  
30055.m001559 B9SCT6 PAC:16816190 Ricinus communis 142  
Cucsa.095890.1 A0A0A0KTS4 PAC:16957956 Cucumis sativus 424  
Cucsa.018160.1 PAC:16951788 Cucumis sativus 91  
Cucsa.248910.2 PAC:16971513 Cucumis sativus 365  
Cucsa.248910.3 PAC:16971514 Cucumis sativus 330  
orange1.1g022012m A0A067FJM0 PAC:18127489 Citrus sinensis 304  
orange1.1g031726m A0A067ESD4 PAC:18111119 Citrus sinensis 154  
orange1.1g027063m A0A067EVW9 PAC:18111115 Citrus sinensis 229  
orange1.1g031803m A0A067EVX3 PAC:18111120 Citrus sinensis 152  
orange1.1g019646m A0A067GUC4 PAC:18102867 Citrus sinensis 337  
AT3G63490.2 F4J296 PAC:19663203 Arabidopsis thaliana 291  
AT3G44900.1 Q9FYC1 PAC:19658906 Arabidopsis thaliana 817  
AT3G52290.1 Q9FT53 PAC:19662675 Arabidopsis thaliana 430  
Thhalv10006108m V4NCL4 PAC:20190750 Eutrema salsugineum 313  
Ciclev10017936m V4U2C9 PAC:20815306 Citrus clementina 387  
Lus10039589 PAC:23164984 Linum usitatissimum 361  
Lus10004871 PAC:23157145 Linum usitatissimum 239  
Lus10015809 PAC:23167706 Linum usitatissimum 187  
Lus10037074 PAC:23152481 Linum usitatissimum 702  
Lus10005380 PAC:23155599 Linum usitatissimum 388  
Potri.014G143000.6 PAC:27035041 Populus trichocarpa 275  
Potri.014G143000.5 PAC:27035040 Populus trichocarpa 338  
Potri.009G057100.4 PAC:26985925 Populus trichocarpa 280  
Potri.009G057100.5 PAC:26985922 Populus trichocarpa 339  
Potri.001G262400.1 PAC:27040720 Populus trichocarpa 380  
Potri.001G262400.7 PAC:27040722 Populus trichocarpa 354  
Potri.001G262400.8 PAC:27040725 Populus trichocarpa 261  

2 Publications

First Author Title Year Journal Volume Pages PubMed ID
            17962298
            18778715