Protein Domain : IPR015962

Type:  Domain Name:  Outer capsid protein Mu1, alpha-bundle subdomain 2
Description:  Mu1 is an outer capsid protein that acts as a reoviral penetration agent. Non-enveloped animal reoviruses must enter host cells by membrane penetration that does not involve membrane fusion, as they lack a viral membrane. Reoviruses are activated by proteolytic cleavage in the intestinal lumen, leading to infectious subviral particles. The core of the virus is coated by a layer of mu1 and sigma3 proteins. Proteases strip off sigma3 exposing mu1, which provides the membrane penetration machinery that perforates the membrane. In addition, N-terminal myristoylation of polypeptide Mu1 are required for site-specific cleavage to Mu1C in transfected cells []. Mu1 forms a trimer, where the three mu1 molecules are coiled around one another with a right-handed twist. The mu1 chain folds into four distinct domains: three intertwined, predominantly alpha helical domains and a jelly-roll beta-sandwich []. This entry represents one of the two alpha-bundle domains. Another outer capsid protein, VP4, also contains the alpha-bundle like domain. Short Name:  Mu1_membr_pen_a-bundle_sub2

0 Child Features

0 Contains

1 Cross References

Identifier
G3DSA:1.10.2040.10

1 Found In

DB identifier Type Name
IPR009113 Family Outer capsid protein Mu1 / VP4

2 GO Annotations

GO Term Gene Name
GO:0009405 IPR015962
GO:0046718 IPR015962

2 Ontology Annotations

GO Term Gene Name
GO:0009405 IPR015962
GO:0046718 IPR015962

0 Parent Features

62 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
424788 D8SR11 PAC:15404527 Selaginella moellendorffii 274  
Potri.017G102700.2 A9PB82 PAC:26983375 Populus trichocarpa 115  
Potri.017G102700.1 A9PB82 PAC:26983374 Populus trichocarpa 115  
GSMUA_Achr11P24420_001 PAC:32315645 Musa acuminata 359  
Pahal.B00236.1 A0A2S3GVV2 PAC:32494431 Panicum hallii 679  
Pahal.A03103.1 PAC:32526103 Panicum hallii 102  
Aqcoe1G319400.1.p A0A2G5CHC4 PAC:33078082 Aquilegia coerulea 501  
LOC_Os04g54220.1 PAC:33109197 Oryza sativa 90  
Zosma151g00060.1 A0A0K9PY86 PAC:33169036 Zostera marina 234  
Brdisv1ABR81001517m.p PAC:34571911 Brachypodium distachyon ABR8 681  
Kaladp0029s0016.2.p PAC:35752327 Kalanchoe fedtschenkoi 130  
Kaladp0029s0016.1.p PAC:35752326 Kalanchoe fedtschenkoi 132  
Oropetium_20150105_08542A PAC:35993061 Oropetium thomaeum 355  
Solyc01g015120.1.1 PAC:36141245 Solanum lycopersicum 112  
Solyc05g014670.1.1 PAC:36146371 Solanum lycopersicum 143  
Solyc11g042980.1.1 PAC:36152072 Solanum lycopersicum 112  
Zm00008a007019_P01 PAC:37205535 Zea mays PH207 437  
Zm00008a018528_P01 PAC:37193971 Zea mays PH207 293  
Potri.017G102700.1.p A9PB82 PAC:37225577 Populus trichocarpa 115  
Potri.017G102700.2.p A9PB82 PAC:37225578 Populus trichocarpa 115  
Podel.17G105500.1.p PAC:37320339 Populus deltoides WV94 115  
PGSC0003DMP400018571 PAC:37441108 Solanum tuberosum 112  
Pavir.2NG031400.1.p PAC:37587790 Panicum virgatum 679  
Pavir.2KG044500.1.p PAC:37565910 Panicum virgatum 685  
Brahy.S03G0033000.1.p PAC:38592704 Brachypodium hybridum 991  
Lsat_1_v5_gn_2_103280.1 A0A2J6KTE0 PAC:38959692 Lactuca sativa 779  
Lsat_1_v5_gn_2_103280.3 PAC:38959691 Lactuca sativa 786  
SbRio.08G120100.1.p PAC:38972846 Sorghum bicolor Rio 347  
Roisl.0031s0123.2.p PAC:39218651 Rorippa islandica 654  
Roisl.0031s0123.1.p PAC:39218650 Rorippa islandica 654  

2 Publications

First Author Title Year Journal Volume Pages PubMed ID
            11832217
            1548757