Gene : Manes.09G168600 M. esculenta v6.1

Defline:  (1 of 1) KOG2496 - Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, cyclin H subunit Genomic Order:  1686
Name:  ? Manes.09G168600 Secondary Identifier:  ? PAC:32340663

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Manes.09G168600 0.5kb upstream 0.5kb upstream 5878 true Chromosome09: 28021491-28027368 Manihot esculenta
Manes.09G168600 0.5kb upstream 0.5kb upstream 500 false Chromosome09: 28021491-28021990 Manihot esculenta
Manes.09G168600 0.5kb downstream 0.5kb downstream 5878 true Chromosome09: 28021991-28027868 Manihot esculenta
Manes.09G168600 0.5kb downstream 0.5kb downstream 500 false Chromosome09: 28027369-28027868 Manihot esculenta
Manes.09G168600 1.0kb upstream 1.0kb upstream 6378 true Chromosome09: 28020991-28027368 Manihot esculenta
Manes.09G168600 1.0kb upstream 1.0kb upstream 1000 false Chromosome09: 28020991-28021990 Manihot esculenta
Manes.09G168600 1.0kb downstream 1.0kb downstream 6378 true Chromosome09: 28021991-28028368 Manihot esculenta
Manes.09G168600 1.0kb downstream 1.0kb downstream 1000 false Chromosome09: 28027369-28028368 Manihot esculenta
Manes.09G168600 2.0kb upstream 2.0kb upstream 7378 true Chromosome09: 28019991-28027368 Manihot esculenta
Manes.09G168600 2.0kb upstream 2.0kb upstream 2000 false Chromosome09: 28019991-28021990 Manihot esculenta
Manes.09G168600 2.0kb downstream 2.0kb downstream 7378 true Chromosome09: 28021991-28029368 Manihot esculenta
Manes.09G168600 2.0kb downstream 2.0kb downstream 2000 false Chromosome09: 28027369-28029368 Manihot esculenta
Manes.09G168600 5.0kb upstream 5.0kb upstream 10378 true Chromosome09: 28016991-28027368 Manihot esculenta
Manes.09G168600 5.0kb upstream 5.0kb upstream 5000 false Chromosome09: 28016991-28021990 Manihot esculenta
Manes.09G168600 5.0kb downstream 5.0kb downstream 10378 true Chromosome09: 28021991-28032368 Manihot esculenta
Manes.09G168600 5.0kb downstream 5.0kb downstream 5000 false Chromosome09: 28027369-28032368 Manihot esculenta
Manes.09G168600 10.0kb upstream 10.0kb upstream 15378 true Chromosome09: 28011991-28027368 Manihot esculenta
Manes.09G168600 10.0kb upstream 10.0kb upstream 10000 false Chromosome09: 28011991-28021990 Manihot esculenta
Manes.09G168600 10.0kb downstream 10.0kb downstream 15378 true Chromosome09: 28021991-28037368 Manihot esculenta
Manes.09G168600 10.0kb downstream 10.0kb downstream 10000 false Chromosome09: 28027369-28037368 Manihot esculenta

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122448494 5262 Malpighiales View MSA
124240841 5268 Malvidae View MSA
124064270 5270 Rosid View MSA
123739279 5271 Pentapetalae View MSA
122793594 5272 Eudicot View MSA
122044761 5273 Angiosperm View MSA
121344916 5274 Embryophyte View MSA
123425113 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain