Gene : Manes.07G052300 M. esculenta v6.1
Defline:  (1 of 1) PTHR22594:SF5 - ASPARTATE--TRNA LIGASE, MITOCHONDRIAL Genomic Order:  523
Name:  ? Manes.07G052300 Secondary Identifier:  ? PAC:32353712
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mesculenta TRNA-CHARGING-PWY Manihot esculenta pathologic  

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Manes.07G052300 0.5kb upstream 0.5kb upstream 8456 true Chromosome07: 5455620-5464075 Manihot esculenta
Manes.07G052300 0.5kb upstream 0.5kb upstream 500 false Chromosome07: 5463576-5464075 Manihot esculenta
Manes.07G052300 0.5kb downstream 0.5kb downstream 8456 true Chromosome07: 5455120-5463575 Manihot esculenta
Manes.07G052300 0.5kb downstream 0.5kb downstream 500 false Chromosome07: 5455120-5455619 Manihot esculenta
Manes.07G052300 1.0kb upstream 1.0kb upstream 8956 true Chromosome07: 5455620-5464575 Manihot esculenta
Manes.07G052300 1.0kb upstream 1.0kb upstream 1000 false Chromosome07: 5463576-5464575 Manihot esculenta
Manes.07G052300 1.0kb downstream 1.0kb downstream 8956 true Chromosome07: 5454620-5463575 Manihot esculenta
Manes.07G052300 1.0kb downstream 1.0kb downstream 1000 false Chromosome07: 5454620-5455619 Manihot esculenta
Manes.07G052300 2.0kb upstream 2.0kb upstream 9956 true Chromosome07: 5455620-5465575 Manihot esculenta
Manes.07G052300 2.0kb upstream 2.0kb upstream 2000 false Chromosome07: 5463576-5465575 Manihot esculenta
Manes.07G052300 2.0kb downstream 2.0kb downstream 9956 true Chromosome07: 5453620-5463575 Manihot esculenta
Manes.07G052300 2.0kb downstream 2.0kb downstream 2000 false Chromosome07: 5453620-5455619 Manihot esculenta
Manes.07G052300 5.0kb upstream 5.0kb upstream 12956 true Chromosome07: 5455620-5468575 Manihot esculenta
Manes.07G052300 5.0kb upstream 5.0kb upstream 5000 false Chromosome07: 5463576-5468575 Manihot esculenta
Manes.07G052300 5.0kb downstream 5.0kb downstream 12956 true Chromosome07: 5450620-5463575 Manihot esculenta
Manes.07G052300 5.0kb downstream 5.0kb downstream 5000 false Chromosome07: 5450620-5455619 Manihot esculenta
Manes.07G052300 10.0kb upstream 10.0kb upstream 17956 true Chromosome07: 5455620-5473575 Manihot esculenta
Manes.07G052300 10.0kb upstream 10.0kb upstream 10000 false Chromosome07: 5463576-5473575 Manihot esculenta
Manes.07G052300 10.0kb downstream 10.0kb downstream 17956 true Chromosome07: 5445620-5463575 Manihot esculenta
Manes.07G052300 10.0kb downstream 10.0kb downstream 10000 false Chromosome07: 5445620-5455619 Manihot esculenta

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122457186 5262 Malpighiales View MSA
124243191 5268 Malvidae View MSA
124067030 5270 Rosid View MSA
123742204 5271 Pentapetalae View MSA
122792299 5272 Eudicot View MSA
122041718 5273 Angiosperm View MSA
121346039 5274 Embryophyte View MSA
123424871 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain