Gene : Manes.05G016500 M. esculenta v6.1
Defline:  (1 of 2) PTHR11516:SF25 - PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT ALPHA-3, CHLOROPLASTIC Genomic Order:  165
Name:  ? Manes.05G016500 Secondary Identifier:  ? PAC:32335850
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mesculenta PWY-5173 Manihot esculenta pathologic  
Mesculenta PWY-5464 Manihot esculenta pathologic  
Mesculenta PYRUVDEHYD-PWY Manihot esculenta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Manes.05G016500 0.5kb upstream 0.5kb upstream 3315 true Chromosome05: 1198446-1201760 Manihot esculenta
Manes.05G016500 0.5kb upstream 0.5kb upstream 500 false Chromosome05: 1201261-1201760 Manihot esculenta
Manes.05G016500 0.5kb downstream 0.5kb downstream 3315 true Chromosome05: 1197946-1201260 Manihot esculenta
Manes.05G016500 0.5kb downstream 0.5kb downstream 500 false Chromosome05: 1197946-1198445 Manihot esculenta
Manes.05G016500 1.0kb upstream 1.0kb upstream 3815 true Chromosome05: 1198446-1202260 Manihot esculenta
Manes.05G016500 1.0kb upstream 1.0kb upstream 1000 false Chromosome05: 1201261-1202260 Manihot esculenta
Manes.05G016500 1.0kb downstream 1.0kb downstream 3815 true Chromosome05: 1197446-1201260 Manihot esculenta
Manes.05G016500 1.0kb downstream 1.0kb downstream 1000 false Chromosome05: 1197446-1198445 Manihot esculenta
Manes.05G016500 2.0kb upstream 2.0kb upstream 4815 true Chromosome05: 1198446-1203260 Manihot esculenta
Manes.05G016500 2.0kb upstream 2.0kb upstream 2000 false Chromosome05: 1201261-1203260 Manihot esculenta
Manes.05G016500 2.0kb downstream 2.0kb downstream 4815 true Chromosome05: 1196446-1201260 Manihot esculenta
Manes.05G016500 2.0kb downstream 2.0kb downstream 2000 false Chromosome05: 1196446-1198445 Manihot esculenta
Manes.05G016500 5.0kb upstream 5.0kb upstream 7815 true Chromosome05: 1198446-1206260 Manihot esculenta
Manes.05G016500 5.0kb upstream 5.0kb upstream 5000 false Chromosome05: 1201261-1206260 Manihot esculenta
Manes.05G016500 5.0kb downstream 5.0kb downstream 7815 true Chromosome05: 1193446-1201260 Manihot esculenta
Manes.05G016500 5.0kb downstream 5.0kb downstream 5000 false Chromosome05: 1193446-1198445 Manihot esculenta
Manes.05G016500 10.0kb upstream 10.0kb upstream 12815 true Chromosome05: 1198446-1211260 Manihot esculenta
Manes.05G016500 10.0kb upstream 10.0kb upstream 10000 false Chromosome05: 1201261-1211260 Manihot esculenta
Manes.05G016500 10.0kb downstream 10.0kb downstream 12815 true Chromosome05: 1188446-1201260 Manihot esculenta
Manes.05G016500 10.0kb downstream 10.0kb downstream 10000 false Chromosome05: 1188446-1198445 Manihot esculenta

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122453802 5262 Malpighiales View MSA
124241416 5268 Malvidae View MSA
124066481 5270 Rosid View MSA
123745685 5271 Pentapetalae View MSA
122791580 5272 Eudicot View MSA
122044804 5273 Angiosperm View MSA
121347425 5274 Embryophyte View MSA
123423942 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain