Gene : Manes.01G011500 M. esculenta v6.1
Defline:  (1 of 1) PTHR31262:SF4 - RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A, CHLOROPLASTIC-RELATED Genomic Order:  115
Name:  ? Manes.01G011500 Secondary Identifier:  ? PAC:32359391
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mesculenta CALVIN-PWY Manihot esculenta pathologic  
Mesculenta PHOTOALL-PWY Manihot esculenta pathologic  
Mesculenta PWY-5723 Manihot esculenta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Manes.01G011500 0.5kb upstream 0.5kb upstream 2553 true Chromosome01: 2015240-2017792 Manihot esculenta
Manes.01G011500 0.5kb upstream 0.5kb upstream 500 false Chromosome01: 2017293-2017792 Manihot esculenta
Manes.01G011500 0.5kb downstream 0.5kb downstream 2553 true Chromosome01: 2014740-2017292 Manihot esculenta
Manes.01G011500 0.5kb downstream 0.5kb downstream 500 false Chromosome01: 2014740-2015239 Manihot esculenta
Manes.01G011500 1.0kb upstream 1.0kb upstream 3053 true Chromosome01: 2015240-2018292 Manihot esculenta
Manes.01G011500 1.0kb upstream 1.0kb upstream 1000 false Chromosome01: 2017293-2018292 Manihot esculenta
Manes.01G011500 1.0kb downstream 1.0kb downstream 3053 true Chromosome01: 2014240-2017292 Manihot esculenta
Manes.01G011500 1.0kb downstream 1.0kb downstream 1000 false Chromosome01: 2014240-2015239 Manihot esculenta
Manes.01G011500 2.0kb upstream 2.0kb upstream 4053 true Chromosome01: 2015240-2019292 Manihot esculenta
Manes.01G011500 2.0kb upstream 2.0kb upstream 2000 false Chromosome01: 2017293-2019292 Manihot esculenta
Manes.01G011500 2.0kb downstream 2.0kb downstream 4053 true Chromosome01: 2013240-2017292 Manihot esculenta
Manes.01G011500 2.0kb downstream 2.0kb downstream 2000 false Chromosome01: 2013240-2015239 Manihot esculenta
Manes.01G011500 5.0kb upstream 5.0kb upstream 7053 true Chromosome01: 2015240-2022292 Manihot esculenta
Manes.01G011500 5.0kb upstream 5.0kb upstream 5000 false Chromosome01: 2017293-2022292 Manihot esculenta
Manes.01G011500 5.0kb downstream 5.0kb downstream 7053 true Chromosome01: 2010240-2017292 Manihot esculenta
Manes.01G011500 5.0kb downstream 5.0kb downstream 5000 false Chromosome01: 2010240-2015239 Manihot esculenta
Manes.01G011500 10.0kb upstream 10.0kb upstream 12053 true Chromosome01: 2015240-2027292 Manihot esculenta
Manes.01G011500 10.0kb upstream 10.0kb upstream 10000 false Chromosome01: 2017293-2027292 Manihot esculenta
Manes.01G011500 10.0kb downstream 10.0kb downstream 12053 true Chromosome01: 2005240-2017292 Manihot esculenta
Manes.01G011500 10.0kb downstream 10.0kb downstream 10000 false Chromosome01: 2005240-2015239 Manihot esculenta

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121779595 5273 Angiosperm View MSA
122428501 5262 Malpighiales Singleton cluster - no MSA
124218198 5268 Malvidae Singleton cluster - no MSA
124037730 5270 Rosid View MSA
123743405 5271 Pentapetalae View MSA
122770649 5272 Eudicot View MSA
121051247 5274 Embryophyte View MSA
123091346 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain