Gene : Manes.01G124200 M. esculenta v6.1

Defline:  (1 of 3) 2.5.1.32 - 15-cis-phytoene synthase / PSase Genomic Order:  1242
Name:  ? Manes.01G124200 Secondary Identifier:  ? PAC:32358536

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mesculenta CAROTENOID-PWY Manihot esculenta pathologic  
Mesculenta PWY-6475 Manihot esculenta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Manes.01G124200 0.5kb upstream 0.5kb upstream 3801 true Chromosome01: 24152920-24156720 Manihot esculenta
Manes.01G124200 0.5kb upstream 0.5kb upstream 500 false Chromosome01: 24152920-24153419 Manihot esculenta
Manes.01G124200 0.5kb downstream 0.5kb downstream 3801 true Chromosome01: 24153420-24157220 Manihot esculenta
Manes.01G124200 0.5kb downstream 0.5kb downstream 500 false Chromosome01: 24156721-24157220 Manihot esculenta
Manes.01G124200 1.0kb upstream 1.0kb upstream 4301 true Chromosome01: 24152420-24156720 Manihot esculenta
Manes.01G124200 1.0kb upstream 1.0kb upstream 1000 false Chromosome01: 24152420-24153419 Manihot esculenta
Manes.01G124200 1.0kb downstream 1.0kb downstream 4301 true Chromosome01: 24153420-24157720 Manihot esculenta
Manes.01G124200 1.0kb downstream 1.0kb downstream 1000 false Chromosome01: 24156721-24157720 Manihot esculenta
Manes.01G124200 2.0kb upstream 2.0kb upstream 5301 true Chromosome01: 24151420-24156720 Manihot esculenta
Manes.01G124200 2.0kb upstream 2.0kb upstream 2000 false Chromosome01: 24151420-24153419 Manihot esculenta
Manes.01G124200 2.0kb downstream 2.0kb downstream 5301 true Chromosome01: 24153420-24158720 Manihot esculenta
Manes.01G124200 2.0kb downstream 2.0kb downstream 2000 false Chromosome01: 24156721-24158720 Manihot esculenta
Manes.01G124200 5.0kb upstream 5.0kb upstream 8301 true Chromosome01: 24148420-24156720 Manihot esculenta
Manes.01G124200 5.0kb upstream 5.0kb upstream 5000 false Chromosome01: 24148420-24153419 Manihot esculenta
Manes.01G124200 5.0kb downstream 5.0kb downstream 8301 true Chromosome01: 24153420-24161720 Manihot esculenta
Manes.01G124200 5.0kb downstream 5.0kb downstream 5000 false Chromosome01: 24156721-24161720 Manihot esculenta
Manes.01G124200 10.0kb upstream 10.0kb upstream 13301 true Chromosome01: 24143420-24156720 Manihot esculenta
Manes.01G124200 10.0kb upstream 10.0kb upstream 10000 false Chromosome01: 24143420-24153419 Manihot esculenta
Manes.01G124200 10.0kb downstream 10.0kb downstream 13301 true Chromosome01: 24153420-24166720 Manihot esculenta
Manes.01G124200 10.0kb downstream 10.0kb downstream 10000 false Chromosome01: 24156721-24166720 Manihot esculenta

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041269 5273 Angiosperm View MSA
122463216 5262 Malpighiales View MSA
124251202 5268 Malvidae View MSA
124069921 5270 Rosid View MSA
123743557 5271 Pentapetalae View MSA
122795955 5272 Eudicot View MSA
121345575 5274 Embryophyte View MSA
123426823 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain