Gene : Manes.10G130400 M. esculenta v6.1

Defline:  (1 of 3) 2.3.1.199//6.2.1.2 - Very-long-chain 3-oxoacyl-CoA synthase / Very-long-chain beta-ketoacyl-CoA synthase // Butyrate--CoA ligase / Fatty acid thiokinase (medium chain) Genomic Order:  1304
Name:  ? Manes.10G130400 Secondary Identifier:  ? PAC:32367603

Sequence Feature Displayer

Ontology Annotation Displayer

18 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mesculenta PWY-1121 Manihot esculenta pathologic  
Mesculenta PWY-321 Manihot esculenta pathologic  
Mesculenta PWY-5080 Manihot esculenta pathologic  
Mesculenta PWY-5136 Manihot esculenta pathologic  
Mesculenta PWY-5143 Manihot esculenta pathologic  
Mesculenta PWY-5147 Manihot esculenta pathologic  
Mesculenta PWY-5156 Manihot esculenta pathologic  
Mesculenta PWY-561 Manihot esculenta pathologic  
Mesculenta PWY-5885 Manihot esculenta pathologic  
Mesculenta PWY-5971 Manihot esculenta pathologic  
Mesculenta PWY-5989 Manihot esculenta pathologic  
Mesculenta PWY-6433 Manihot esculenta pathologic  
Mesculenta PWY-6598 Manihot esculenta pathologic  
Mesculenta PWY-6733 Manihot esculenta pathologic  
Mesculenta PWY-6803 Manihot esculenta pathologic  
Mesculenta PWY-7036 Manihot esculenta pathologic  
Mesculenta PWY-7601 Manihot esculenta pathologic  
Mesculenta PWY-7619 Manihot esculenta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Manes.10G130400 0.5kb upstream 0.5kb upstream 1585 true Chromosome10: 24256939-24258523 Manihot esculenta
Manes.10G130400 0.5kb upstream 0.5kb upstream 500 false Chromosome10: 24256939-24257438 Manihot esculenta
Manes.10G130400 0.5kb downstream 0.5kb downstream 1585 true Chromosome10: 24257439-24259023 Manihot esculenta
Manes.10G130400 0.5kb downstream 0.5kb downstream 500 false Chromosome10: 24258524-24259023 Manihot esculenta
Manes.10G130400 1.0kb upstream 1.0kb upstream 2085 true Chromosome10: 24256439-24258523 Manihot esculenta
Manes.10G130400 1.0kb upstream 1.0kb upstream 1000 false Chromosome10: 24256439-24257438 Manihot esculenta
Manes.10G130400 1.0kb downstream 1.0kb downstream 2085 true Chromosome10: 24257439-24259523 Manihot esculenta
Manes.10G130400 1.0kb downstream 1.0kb downstream 1000 false Chromosome10: 24258524-24259523 Manihot esculenta
Manes.10G130400 2.0kb upstream 2.0kb upstream 3085 true Chromosome10: 24255439-24258523 Manihot esculenta
Manes.10G130400 2.0kb upstream 2.0kb upstream 2000 false Chromosome10: 24255439-24257438 Manihot esculenta
Manes.10G130400 2.0kb downstream 2.0kb downstream 3085 true Chromosome10: 24257439-24260523 Manihot esculenta
Manes.10G130400 2.0kb downstream 2.0kb downstream 2000 false Chromosome10: 24258524-24260523 Manihot esculenta
Manes.10G130400 5.0kb upstream 5.0kb upstream 6085 true Chromosome10: 24252439-24258523 Manihot esculenta
Manes.10G130400 5.0kb upstream 5.0kb upstream 5000 false Chromosome10: 24252439-24257438 Manihot esculenta
Manes.10G130400 5.0kb downstream 5.0kb downstream 6085 true Chromosome10: 24257439-24263523 Manihot esculenta
Manes.10G130400 5.0kb downstream 5.0kb downstream 5000 false Chromosome10: 24258524-24263523 Manihot esculenta
Manes.10G130400 10.0kb upstream 10.0kb upstream 11085 true Chromosome10: 24247439-24258523 Manihot esculenta
Manes.10G130400 10.0kb upstream 10.0kb upstream 10000 false Chromosome10: 24247439-24257438 Manihot esculenta
Manes.10G130400 10.0kb downstream 10.0kb downstream 11085 true Chromosome10: 24257439-24268523 Manihot esculenta
Manes.10G130400 10.0kb downstream 10.0kb downstream 10000 false Chromosome10: 24258524-24268523 Manihot esculenta

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122456701 5262 Malpighiales View MSA
124248997 5268 Malvidae View MSA
124069111 5270 Rosid View MSA
123751045 5271 Pentapetalae View MSA
122796909 5272 Eudicot View MSA
122047091 5273 Angiosperm View MSA
121347411 5274 Embryophyte View MSA
123427662 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain