Gene : Manes.11G098400 M. esculenta v6.1
Defline:  (1 of 1) PTHR12001:SF41 - HETERODIMERIC GERANYLGERANYL PYROPHOSPHATE SYNTHASE SMALL SUBUNIT, CHLOROPLASTIC Genomic Order:  984
Name:  ? Manes.11G098400 Secondary Identifier:  ? PAC:32356446
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mesculenta PWY-5120 Manihot esculenta pathologic  
Mesculenta PWY-5910 Manihot esculenta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Manes.11G098400 0.5kb upstream 0.5kb upstream 3017 true Chromosome11: 16636226-16639242 Manihot esculenta
Manes.11G098400 0.5kb upstream 0.5kb upstream 500 false Chromosome11: 16638743-16639242 Manihot esculenta
Manes.11G098400 0.5kb downstream 0.5kb downstream 3017 true Chromosome11: 16635726-16638742 Manihot esculenta
Manes.11G098400 0.5kb downstream 0.5kb downstream 500 false Chromosome11: 16635726-16636225 Manihot esculenta
Manes.11G098400 1.0kb upstream 1.0kb upstream 3517 true Chromosome11: 16636226-16639742 Manihot esculenta
Manes.11G098400 1.0kb upstream 1.0kb upstream 1000 false Chromosome11: 16638743-16639742 Manihot esculenta
Manes.11G098400 1.0kb downstream 1.0kb downstream 3517 true Chromosome11: 16635226-16638742 Manihot esculenta
Manes.11G098400 1.0kb downstream 1.0kb downstream 1000 false Chromosome11: 16635226-16636225 Manihot esculenta
Manes.11G098400 2.0kb upstream 2.0kb upstream 4517 true Chromosome11: 16636226-16640742 Manihot esculenta
Manes.11G098400 2.0kb upstream 2.0kb upstream 2000 false Chromosome11: 16638743-16640742 Manihot esculenta
Manes.11G098400 2.0kb downstream 2.0kb downstream 4517 true Chromosome11: 16634226-16638742 Manihot esculenta
Manes.11G098400 2.0kb downstream 2.0kb downstream 2000 false Chromosome11: 16634226-16636225 Manihot esculenta
Manes.11G098400 5.0kb upstream 5.0kb upstream 7517 true Chromosome11: 16636226-16643742 Manihot esculenta
Manes.11G098400 5.0kb upstream 5.0kb upstream 5000 false Chromosome11: 16638743-16643742 Manihot esculenta
Manes.11G098400 5.0kb downstream 5.0kb downstream 7517 true Chromosome11: 16631226-16638742 Manihot esculenta
Manes.11G098400 5.0kb downstream 5.0kb downstream 5000 false Chromosome11: 16631226-16636225 Manihot esculenta
Manes.11G098400 10.0kb upstream 10.0kb upstream 12517 true Chromosome11: 16636226-16648742 Manihot esculenta
Manes.11G098400 10.0kb upstream 10.0kb upstream 10000 false Chromosome11: 16638743-16648742 Manihot esculenta
Manes.11G098400 10.0kb downstream 10.0kb downstream 12517 true Chromosome11: 16626226-16638742 Manihot esculenta
Manes.11G098400 10.0kb downstream 10.0kb downstream 10000 false Chromosome11: 16626226-16636225 Manihot esculenta

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122456389 5262 Malpighiales View MSA
124238583 5268 Malvidae View MSA
124050179 5270 Rosid View MSA
123740099 5271 Pentapetalae View MSA
122794742 5272 Eudicot View MSA
122045849 5273 Angiosperm View MSA
121310516 5274 Embryophyte View MSA
123347979 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain