Gene : Manes.11G102600 M. esculenta v6.1

Defline:  (1 of 2) K01899 - succinyl-CoA synthetase alpha subunit Genomic Order:  1026
Name:  ? Manes.11G102600 Secondary Identifier:  ? PAC:32356326

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mesculenta PWY-5464 Manihot esculenta pathologic  
Mesculenta PWY-5690 Manihot esculenta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Manes.11G102600 0.5kb upstream 0.5kb upstream 14590 true Chromosome11: 18438438-18453027 Manihot esculenta
Manes.11G102600 0.5kb upstream 0.5kb upstream 500 false Chromosome11: 18452528-18453027 Manihot esculenta
Manes.11G102600 0.5kb downstream 0.5kb downstream 14590 true Chromosome11: 18437938-18452527 Manihot esculenta
Manes.11G102600 0.5kb downstream 0.5kb downstream 500 false Chromosome11: 18437938-18438437 Manihot esculenta
Manes.11G102600 1.0kb upstream 1.0kb upstream 15090 true Chromosome11: 18438438-18453527 Manihot esculenta
Manes.11G102600 1.0kb upstream 1.0kb upstream 1000 false Chromosome11: 18452528-18453527 Manihot esculenta
Manes.11G102600 1.0kb downstream 1.0kb downstream 15090 true Chromosome11: 18437438-18452527 Manihot esculenta
Manes.11G102600 1.0kb downstream 1.0kb downstream 1000 false Chromosome11: 18437438-18438437 Manihot esculenta
Manes.11G102600 2.0kb upstream 2.0kb upstream 16090 true Chromosome11: 18438438-18454527 Manihot esculenta
Manes.11G102600 2.0kb upstream 2.0kb upstream 2000 false Chromosome11: 18452528-18454527 Manihot esculenta
Manes.11G102600 2.0kb downstream 2.0kb downstream 16090 true Chromosome11: 18436438-18452527 Manihot esculenta
Manes.11G102600 2.0kb downstream 2.0kb downstream 2000 false Chromosome11: 18436438-18438437 Manihot esculenta
Manes.11G102600 5.0kb upstream 5.0kb upstream 19090 true Chromosome11: 18438438-18457527 Manihot esculenta
Manes.11G102600 5.0kb upstream 5.0kb upstream 5000 false Chromosome11: 18452528-18457527 Manihot esculenta
Manes.11G102600 5.0kb downstream 5.0kb downstream 19090 true Chromosome11: 18433438-18452527 Manihot esculenta
Manes.11G102600 5.0kb downstream 5.0kb downstream 5000 false Chromosome11: 18433438-18438437 Manihot esculenta
Manes.11G102600 10.0kb upstream 10.0kb upstream 24090 true Chromosome11: 18438438-18462527 Manihot esculenta
Manes.11G102600 10.0kb upstream 10.0kb upstream 10000 false Chromosome11: 18452528-18462527 Manihot esculenta
Manes.11G102600 10.0kb downstream 10.0kb downstream 24090 true Chromosome11: 18428438-18452527 Manihot esculenta
Manes.11G102600 10.0kb downstream 10.0kb downstream 10000 false Chromosome11: 18428438-18438437 Manihot esculenta

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122460895 5262 Malpighiales View MSA
124250817 5268 Malvidae View MSA
124071271 5270 Rosid View MSA
123744798 5271 Pentapetalae View MSA
122787057 5272 Eudicot View MSA
122044805 5273 Angiosperm View MSA
121349115 5274 Embryophyte View MSA
123424705 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain