Gene : Manes.12G070400 M. esculenta v6.1
Defline:  (1 of 5) 1.1.1.25 - Shikimate dehydrogenase / Shikimate:NADP(+) oxidoreductase Genomic Order:  704
Name:  ? Manes.12G070400 Secondary Identifier:  ? PAC:32344233
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mesculenta ARO-PWY Manihot esculenta pathologic  
Mesculenta PWY-6163 Manihot esculenta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Manes.12G070400 0.5kb upstream 0.5kb upstream 9805 true Chromosome12: 6983853-6993657 Manihot esculenta
Manes.12G070400 0.5kb upstream 0.5kb upstream 500 false Chromosome12: 6993158-6993657 Manihot esculenta
Manes.12G070400 0.5kb downstream 0.5kb downstream 9805 true Chromosome12: 6983353-6993157 Manihot esculenta
Manes.12G070400 0.5kb downstream 0.5kb downstream 500 false Chromosome12: 6983353-6983852 Manihot esculenta
Manes.12G070400 1.0kb upstream 1.0kb upstream 10305 true Chromosome12: 6983853-6994157 Manihot esculenta
Manes.12G070400 1.0kb upstream 1.0kb upstream 1000 false Chromosome12: 6993158-6994157 Manihot esculenta
Manes.12G070400 1.0kb downstream 1.0kb downstream 10305 true Chromosome12: 6982853-6993157 Manihot esculenta
Manes.12G070400 1.0kb downstream 1.0kb downstream 1000 false Chromosome12: 6982853-6983852 Manihot esculenta
Manes.12G070400 2.0kb upstream 2.0kb upstream 11305 true Chromosome12: 6983853-6995157 Manihot esculenta
Manes.12G070400 2.0kb upstream 2.0kb upstream 2000 false Chromosome12: 6993158-6995157 Manihot esculenta
Manes.12G070400 2.0kb downstream 2.0kb downstream 11305 true Chromosome12: 6981853-6993157 Manihot esculenta
Manes.12G070400 2.0kb downstream 2.0kb downstream 2000 false Chromosome12: 6981853-6983852 Manihot esculenta
Manes.12G070400 5.0kb upstream 5.0kb upstream 14305 true Chromosome12: 6983853-6998157 Manihot esculenta
Manes.12G070400 5.0kb upstream 5.0kb upstream 5000 false Chromosome12: 6993158-6998157 Manihot esculenta
Manes.12G070400 5.0kb downstream 5.0kb downstream 14305 true Chromosome12: 6978853-6993157 Manihot esculenta
Manes.12G070400 5.0kb downstream 5.0kb downstream 5000 false Chromosome12: 6978853-6983852 Manihot esculenta
Manes.12G070400 10.0kb upstream 10.0kb upstream 19305 true Chromosome12: 6983853-7003157 Manihot esculenta
Manes.12G070400 10.0kb upstream 10.0kb upstream 10000 false Chromosome12: 6993158-7003157 Manihot esculenta
Manes.12G070400 10.0kb downstream 10.0kb downstream 19305 true Chromosome12: 6973853-6993157 Manihot esculenta
Manes.12G070400 10.0kb downstream 10.0kb downstream 10000 false Chromosome12: 6973853-6983852 Manihot esculenta

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122451145 5262 Malpighiales View MSA
124242776 5268 Malvidae View MSA
124068153 5270 Rosid View MSA
123743031 5271 Pentapetalae View MSA
122788487 5272 Eudicot View MSA
122045026 5273 Angiosperm View MSA
121345779 5274 Embryophyte View MSA
123427556 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain