Gene : Manes.12G055600 M. esculenta v6.1
Defline:  (1 of 1) PTHR34803:SF2 - PHOTOSYSTEM I REACTION CENTER SUBUNIT XI, CHLOROPLASTIC Genomic Order:  556
Name:  ? Manes.12G055600 Secondary Identifier:  ? PAC:32344798
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mesculenta PHOTOALL-PWY Manihot esculenta pathologic  
Mesculenta PWY-101 Manihot esculenta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Manes.12G055600 0.5kb upstream 0.5kb upstream 1980 true Chromosome12: 4902528-4904507 Manihot esculenta
Manes.12G055600 0.5kb upstream 0.5kb upstream 500 false Chromosome12: 4902528-4903027 Manihot esculenta
Manes.12G055600 0.5kb downstream 0.5kb downstream 1980 true Chromosome12: 4903028-4905007 Manihot esculenta
Manes.12G055600 0.5kb downstream 0.5kb downstream 500 false Chromosome12: 4904508-4905007 Manihot esculenta
Manes.12G055600 1.0kb upstream 1.0kb upstream 2480 true Chromosome12: 4902028-4904507 Manihot esculenta
Manes.12G055600 1.0kb upstream 1.0kb upstream 1000 false Chromosome12: 4902028-4903027 Manihot esculenta
Manes.12G055600 1.0kb downstream 1.0kb downstream 2480 true Chromosome12: 4903028-4905507 Manihot esculenta
Manes.12G055600 1.0kb downstream 1.0kb downstream 1000 false Chromosome12: 4904508-4905507 Manihot esculenta
Manes.12G055600 2.0kb upstream 2.0kb upstream 3480 true Chromosome12: 4901028-4904507 Manihot esculenta
Manes.12G055600 2.0kb upstream 2.0kb upstream 2000 false Chromosome12: 4901028-4903027 Manihot esculenta
Manes.12G055600 2.0kb downstream 2.0kb downstream 3480 true Chromosome12: 4903028-4906507 Manihot esculenta
Manes.12G055600 2.0kb downstream 2.0kb downstream 2000 false Chromosome12: 4904508-4906507 Manihot esculenta
Manes.12G055600 5.0kb upstream 5.0kb upstream 6480 true Chromosome12: 4898028-4904507 Manihot esculenta
Manes.12G055600 5.0kb upstream 5.0kb upstream 5000 false Chromosome12: 4898028-4903027 Manihot esculenta
Manes.12G055600 5.0kb downstream 5.0kb downstream 6480 true Chromosome12: 4903028-4909507 Manihot esculenta
Manes.12G055600 5.0kb downstream 5.0kb downstream 5000 false Chromosome12: 4904508-4909507 Manihot esculenta
Manes.12G055600 10.0kb upstream 10.0kb upstream 11480 true Chromosome12: 4893028-4904507 Manihot esculenta
Manes.12G055600 10.0kb upstream 10.0kb upstream 10000 false Chromosome12: 4893028-4903027 Manihot esculenta
Manes.12G055600 10.0kb downstream 10.0kb downstream 11480 true Chromosome12: 4903028-4914507 Manihot esculenta
Manes.12G055600 10.0kb downstream 10.0kb downstream 10000 false Chromosome12: 4904508-4914507 Manihot esculenta

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040995 5273 Angiosperm View MSA
122454121 5262 Malpighiales View MSA
124243038 5268 Malvidae View MSA
124061167 5270 Rosid View MSA
123750401 5271 Pentapetalae View MSA
122793402 5272 Eudicot View MSA
121343870 5274 Embryophyte View MSA
123424325 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain