Gene : Manes.13G154200 M. esculenta v6.1
Defline:  (1 of 1) PF02900 - Catalytic LigB subunit of aromatic ring-opening dioxygenase (LigB) Genomic Order:  1542
Name:  ? Manes.13G154200 Secondary Identifier:  ? PAC:32339197
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Manes.13G154200 0.5kb upstream 0.5kb upstream 2075 true Chromosome13: 27968397-27970471 Manihot esculenta
Manes.13G154200 0.5kb upstream 0.5kb upstream 500 false Chromosome13: 27969972-27970471 Manihot esculenta
Manes.13G154200 0.5kb downstream 0.5kb downstream 2075 true Chromosome13: 27967897-27969971 Manihot esculenta
Manes.13G154200 0.5kb downstream 0.5kb downstream 500 false Chromosome13: 27967897-27968396 Manihot esculenta
Manes.13G154200 1.0kb upstream 1.0kb upstream 2575 true Chromosome13: 27968397-27970971 Manihot esculenta
Manes.13G154200 1.0kb upstream 1.0kb upstream 1000 false Chromosome13: 27969972-27970971 Manihot esculenta
Manes.13G154200 1.0kb downstream 1.0kb downstream 2575 true Chromosome13: 27967397-27969971 Manihot esculenta
Manes.13G154200 1.0kb downstream 1.0kb downstream 1000 false Chromosome13: 27967397-27968396 Manihot esculenta
Manes.13G154200 2.0kb upstream 2.0kb upstream 3575 true Chromosome13: 27968397-27971971 Manihot esculenta
Manes.13G154200 2.0kb upstream 2.0kb upstream 2000 false Chromosome13: 27969972-27971971 Manihot esculenta
Manes.13G154200 2.0kb downstream 2.0kb downstream 3575 true Chromosome13: 27966397-27969971 Manihot esculenta
Manes.13G154200 2.0kb downstream 2.0kb downstream 2000 false Chromosome13: 27966397-27968396 Manihot esculenta
Manes.13G154200 5.0kb upstream 5.0kb upstream 6575 true Chromosome13: 27968397-27974971 Manihot esculenta
Manes.13G154200 5.0kb upstream 5.0kb upstream 5000 false Chromosome13: 27969972-27974971 Manihot esculenta
Manes.13G154200 5.0kb downstream 5.0kb downstream 6575 true Chromosome13: 27963397-27969971 Manihot esculenta
Manes.13G154200 5.0kb downstream 5.0kb downstream 5000 false Chromosome13: 27963397-27968396 Manihot esculenta
Manes.13G154200 10.0kb upstream 10.0kb upstream 11575 true Chromosome13: 27968397-27979971 Manihot esculenta
Manes.13G154200 10.0kb upstream 10.0kb upstream 10000 false Chromosome13: 27969972-27979971 Manihot esculenta
Manes.13G154200 10.0kb downstream 10.0kb downstream 11575 true Chromosome13: 27958397-27969971 Manihot esculenta
Manes.13G154200 10.0kb downstream 10.0kb downstream 10000 false Chromosome13: 27958397-27968396 Manihot esculenta

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122426438 5262 Malpighiales View MSA
124250769 5268 Malvidae View MSA
124061164 5270 Rosid View MSA
123748112 5271 Pentapetalae View MSA
122788148 5272 Eudicot View MSA
122046323 5273 Angiosperm View MSA
121350065 5274 Embryophyte View MSA
123426386 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain