Gene : Manes.15G154800 M. esculenta v6.1
Defline:  (1 of 12) PF05627 - Cleavage site for pathogenic type III effector avirulence factor Avr (AvrRpt-cleavage) Genomic Order:  1548
Name:  ? Manes.15G154800 Secondary Identifier:  ? PAC:32350439
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Manes.15G154800 0.5kb upstream 0.5kb upstream 933 true Chromosome15: 12191526-12192458 Manihot esculenta
Manes.15G154800 0.5kb upstream 0.5kb upstream 500 false Chromosome15: 12191959-12192458 Manihot esculenta
Manes.15G154800 0.5kb downstream 0.5kb downstream 933 true Chromosome15: 12191026-12191958 Manihot esculenta
Manes.15G154800 0.5kb downstream 0.5kb downstream 500 false Chromosome15: 12191026-12191525 Manihot esculenta
Manes.15G154800 1.0kb upstream 1.0kb upstream 1433 true Chromosome15: 12191526-12192958 Manihot esculenta
Manes.15G154800 1.0kb upstream 1.0kb upstream 1000 false Chromosome15: 12191959-12192958 Manihot esculenta
Manes.15G154800 1.0kb downstream 1.0kb downstream 1433 true Chromosome15: 12190526-12191958 Manihot esculenta
Manes.15G154800 1.0kb downstream 1.0kb downstream 1000 false Chromosome15: 12190526-12191525 Manihot esculenta
Manes.15G154800 2.0kb upstream 2.0kb upstream 2433 true Chromosome15: 12191526-12193958 Manihot esculenta
Manes.15G154800 2.0kb upstream 2.0kb upstream 2000 false Chromosome15: 12191959-12193958 Manihot esculenta
Manes.15G154800 2.0kb downstream 2.0kb downstream 2433 true Chromosome15: 12189526-12191958 Manihot esculenta
Manes.15G154800 2.0kb downstream 2.0kb downstream 2000 false Chromosome15: 12189526-12191525 Manihot esculenta
Manes.15G154800 5.0kb upstream 5.0kb upstream 5433 true Chromosome15: 12191526-12196958 Manihot esculenta
Manes.15G154800 5.0kb upstream 5.0kb upstream 5000 false Chromosome15: 12191959-12196958 Manihot esculenta
Manes.15G154800 5.0kb downstream 5.0kb downstream 5433 true Chromosome15: 12186526-12191958 Manihot esculenta
Manes.15G154800 5.0kb downstream 5.0kb downstream 5000 false Chromosome15: 12186526-12191525 Manihot esculenta
Manes.15G154800 10.0kb upstream 10.0kb upstream 10433 true Chromosome15: 12191526-12201958 Manihot esculenta
Manes.15G154800 10.0kb upstream 10.0kb upstream 10000 false Chromosome15: 12191959-12201958 Manihot esculenta
Manes.15G154800 10.0kb downstream 10.0kb downstream 10433 true Chromosome15: 12181526-12191958 Manihot esculenta
Manes.15G154800 10.0kb downstream 10.0kb downstream 10000 false Chromosome15: 12181526-12191525 Manihot esculenta

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122461437 5262 Malpighiales View MSA
124248769 5268 Malvidae View MSA
124074284 5270 Rosid View MSA
123751462 5271 Pentapetalae View MSA
122795351 5272 Eudicot View MSA
122048962 5273 Angiosperm View MSA
121311190 5274 Embryophyte View MSA
123348519 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain