Gene : Manes.18G055500 M. esculenta v6.1
Defline:  (1 of 1) PTHR11680:SF12 - SERINE HYDROXYMETHYLTRANSFERASE 2, MITOCHONDRIAL Genomic Order:  555
Name:  ? Manes.18G055500 Secondary Identifier:  ? PAC:32348496
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mesculenta GLYSYN-PWY Manihot esculenta pathologic  
Mesculenta PWY-2161 Manihot esculenta pathologic  
Mesculenta PWY-3841 Manihot esculenta pathologic  
Mesculenta SER-GLYSYN-PWY Manihot esculenta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Manes.18G055500 0.5kb upstream 0.5kb upstream 5355 true Chromosome18: 4688313-4693667 Manihot esculenta
Manes.18G055500 0.5kb upstream 0.5kb upstream 500 false Chromosome18: 4693168-4693667 Manihot esculenta
Manes.18G055500 0.5kb downstream 0.5kb downstream 5355 true Chromosome18: 4687813-4693167 Manihot esculenta
Manes.18G055500 0.5kb downstream 0.5kb downstream 500 false Chromosome18: 4687813-4688312 Manihot esculenta
Manes.18G055500 1.0kb upstream 1.0kb upstream 5855 true Chromosome18: 4688313-4694167 Manihot esculenta
Manes.18G055500 1.0kb upstream 1.0kb upstream 1000 false Chromosome18: 4693168-4694167 Manihot esculenta
Manes.18G055500 1.0kb downstream 1.0kb downstream 5855 true Chromosome18: 4687313-4693167 Manihot esculenta
Manes.18G055500 1.0kb downstream 1.0kb downstream 1000 false Chromosome18: 4687313-4688312 Manihot esculenta
Manes.18G055500 2.0kb upstream 2.0kb upstream 6855 true Chromosome18: 4688313-4695167 Manihot esculenta
Manes.18G055500 2.0kb upstream 2.0kb upstream 2000 false Chromosome18: 4693168-4695167 Manihot esculenta
Manes.18G055500 2.0kb downstream 2.0kb downstream 6855 true Chromosome18: 4686313-4693167 Manihot esculenta
Manes.18G055500 2.0kb downstream 2.0kb downstream 2000 false Chromosome18: 4686313-4688312 Manihot esculenta
Manes.18G055500 5.0kb upstream 5.0kb upstream 9855 true Chromosome18: 4688313-4698167 Manihot esculenta
Manes.18G055500 5.0kb upstream 5.0kb upstream 5000 false Chromosome18: 4693168-4698167 Manihot esculenta
Manes.18G055500 5.0kb downstream 5.0kb downstream 9855 true Chromosome18: 4683313-4693167 Manihot esculenta
Manes.18G055500 5.0kb downstream 5.0kb downstream 5000 false Chromosome18: 4683313-4688312 Manihot esculenta
Manes.18G055500 10.0kb upstream 10.0kb upstream 14855 true Chromosome18: 4688313-4703167 Manihot esculenta
Manes.18G055500 10.0kb upstream 10.0kb upstream 10000 false Chromosome18: 4693168-4703167 Manihot esculenta
Manes.18G055500 10.0kb downstream 10.0kb downstream 14855 true Chromosome18: 4678313-4693167 Manihot esculenta
Manes.18G055500 10.0kb downstream 10.0kb downstream 10000 false Chromosome18: 4678313-4688312 Manihot esculenta

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122449832 5262 Malpighiales View MSA
124239143 5268 Malvidae View MSA
124064979 5270 Rosid View MSA
123747223 5271 Pentapetalae View MSA
122789073 5272 Eudicot View MSA
122045639 5273 Angiosperm View MSA
121346714 5274 Embryophyte View MSA
123424879 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain