Gene : Manes.17G117500 M. esculenta v6.1
Defline:  (1 of 4) 2.5.1.21 - Squalene synthase / Squalene synthetase Genomic Order:  1175
Name:  ? Manes.17G117500 Secondary Identifier:  ? PAC:32366511
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mesculenta PWY-2541 Manihot esculenta pathologic  
Mesculenta PWY-5670 Manihot esculenta pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Manes.17G117500 0.5kb upstream 0.5kb upstream 1019 true Chromosome17: 25966220-25967238 Manihot esculenta
Manes.17G117500 0.5kb upstream 0.5kb upstream 500 false Chromosome17: 25966739-25967238 Manihot esculenta
Manes.17G117500 0.5kb downstream 0.5kb downstream 1019 true Chromosome17: 25965720-25966738 Manihot esculenta
Manes.17G117500 0.5kb downstream 0.5kb downstream 500 false Chromosome17: 25965720-25966219 Manihot esculenta
Manes.17G117500 1.0kb upstream 1.0kb upstream 1519 true Chromosome17: 25966220-25967738 Manihot esculenta
Manes.17G117500 1.0kb upstream 1.0kb upstream 1000 false Chromosome17: 25966739-25967738 Manihot esculenta
Manes.17G117500 1.0kb downstream 1.0kb downstream 1519 true Chromosome17: 25965220-25966738 Manihot esculenta
Manes.17G117500 1.0kb downstream 1.0kb downstream 1000 false Chromosome17: 25965220-25966219 Manihot esculenta
Manes.17G117500 2.0kb upstream 2.0kb upstream 2519 true Chromosome17: 25966220-25968738 Manihot esculenta
Manes.17G117500 2.0kb upstream 2.0kb upstream 2000 false Chromosome17: 25966739-25968738 Manihot esculenta
Manes.17G117500 2.0kb downstream 2.0kb downstream 2519 true Chromosome17: 25964220-25966738 Manihot esculenta
Manes.17G117500 2.0kb downstream 2.0kb downstream 2000 false Chromosome17: 25964220-25966219 Manihot esculenta
Manes.17G117500 5.0kb upstream 5.0kb upstream 5519 true Chromosome17: 25966220-25971738 Manihot esculenta
Manes.17G117500 5.0kb upstream 5.0kb upstream 5000 false Chromosome17: 25966739-25971738 Manihot esculenta
Manes.17G117500 5.0kb downstream 5.0kb downstream 5519 true Chromosome17: 25961220-25966738 Manihot esculenta
Manes.17G117500 5.0kb downstream 5.0kb downstream 5000 false Chromosome17: 25961220-25966219 Manihot esculenta
Manes.17G117500 10.0kb upstream 10.0kb upstream 10519 true Chromosome17: 25966220-25976738 Manihot esculenta
Manes.17G117500 10.0kb upstream 10.0kb upstream 10000 false Chromosome17: 25966739-25976738 Manihot esculenta
Manes.17G117500 10.0kb downstream 10.0kb downstream 10519 true Chromosome17: 25956220-25966738 Manihot esculenta
Manes.17G117500 10.0kb downstream 10.0kb downstream 10000 false Chromosome17: 25956220-25966219 Manihot esculenta

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791781 5273 Angiosperm View MSA
122459438 5262 Malpighiales View MSA
124243875 5268 Malvidae View MSA
124050495 5270 Rosid View MSA
123741246 5271 Pentapetalae View MSA
122792115 5272 Eudicot View MSA
121063071 5274 Embryophyte View MSA
123102856 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain