Gene : Manes.S091300 M. esculenta v6.1
Defline:  (1 of 2) PTHR23321:SF31 - RIBULOSE BISPHOSPHATE CARBOXYLASE LARGE CHAIN-RELATED Genomic Order:  1
Name:  ? Manes.S091300 Secondary Identifier:  ? PAC:32348458
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mesculenta CALVIN-PWY Manihot esculenta pathologic  
Mesculenta PHOTOALL-PWY Manihot esculenta pathologic  
Mesculenta PWY-5723 Manihot esculenta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Manes.S091300 0.5kb upstream 0.5kb upstream 1097 true Scaffold01477: 9359-10455 Manihot esculenta
Manes.S091300 0.5kb upstream 0.5kb upstream 500 false Scaffold01477: 9359-9858 Manihot esculenta
Manes.S091300 0.5kb downstream 0.5kb downstream 1097 true Scaffold01477: 9859-10955 Manihot esculenta
Manes.S091300 0.5kb downstream 0.5kb downstream 500 false Scaffold01477: 10456-10955 Manihot esculenta
Manes.S091300 1.0kb upstream 1.0kb upstream 1597 true Scaffold01477: 8859-10455 Manihot esculenta
Manes.S091300 1.0kb upstream 1.0kb upstream 1000 false Scaffold01477: 8859-9858 Manihot esculenta
Manes.S091300 1.0kb downstream 1.0kb downstream 1597 true Scaffold01477: 9859-11455 Manihot esculenta
Manes.S091300 1.0kb downstream 1.0kb downstream 1000 false Scaffold01477: 10456-11455 Manihot esculenta
Manes.S091300 2.0kb upstream 2.0kb upstream 2597 true Scaffold01477: 7859-10455 Manihot esculenta
Manes.S091300 2.0kb upstream 2.0kb upstream 2000 false Scaffold01477: 7859-9858 Manihot esculenta
Manes.S091300 2.0kb downstream 2.0kb downstream 2597 true Scaffold01477: 9859-12455 Manihot esculenta
Manes.S091300 2.0kb downstream 2.0kb downstream 2000 false Scaffold01477: 10456-12455 Manihot esculenta
Manes.S091300 5.0kb upstream 5.0kb upstream 5597 true Scaffold01477: 4859-10455 Manihot esculenta
Manes.S091300 5.0kb upstream 5.0kb upstream 5000 false Scaffold01477: 4859-9858 Manihot esculenta
Manes.S091300 5.0kb downstream 5.0kb downstream 5597 true Scaffold01477: 9859-15455 Manihot esculenta
Manes.S091300 5.0kb downstream 5.0kb downstream 5000 false Scaffold01477: 10456-15455 Manihot esculenta
Manes.S091300 10.0kb upstream 10.0kb upstream 10455 true Scaffold01477: 1-10455 Manihot esculenta
Manes.S091300 10.0kb upstream 10.0kb upstream 9858 false Scaffold01477: 1-9858 Manihot esculenta
Manes.S091300 10.0kb downstream 10.0kb downstream 9545 true Scaffold01477: 9859-19403 Manihot esculenta
Manes.S091300 10.0kb downstream 10.0kb downstream 8948 false Scaffold01477: 10456-19403 Manihot esculenta

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122435235 5262 Malpighiales Singleton cluster - no MSA
124224010 5268 Malvidae Singleton cluster - no MSA
124037716 5270 Rosid View MSA
123751375 5271 Pentapetalae View MSA
122794662 5272 Eudicot View MSA
122051262 5273 Angiosperm View MSA
121312381 5274 Embryophyte View MSA
123349558 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain