Gene : Manes.S002100 M. esculenta v6.1
Defline:  (1 of 2) PTHR31689:SF0 - DIAMINOPIMELATE EPIMERASE, CHLOROPLASTIC Genomic Order:  3
Name:  ? Manes.S002100 Secondary Identifier:  ? PAC:32339710
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mesculenta PWY-5097 Manihot esculenta pathologic  
Mesculenta PWY-724 Manihot esculenta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Manes.S002100 0.5kb upstream 0.5kb upstream 4997 true Scaffold00310: 296507-301503 Manihot esculenta
Manes.S002100 0.5kb upstream 0.5kb upstream 500 false Scaffold00310: 296507-297006 Manihot esculenta
Manes.S002100 0.5kb downstream 0.5kb downstream 4997 true Scaffold00310: 297007-302003 Manihot esculenta
Manes.S002100 0.5kb downstream 0.5kb downstream 500 false Scaffold00310: 301504-302003 Manihot esculenta
Manes.S002100 1.0kb upstream 1.0kb upstream 5497 true Scaffold00310: 296007-301503 Manihot esculenta
Manes.S002100 1.0kb upstream 1.0kb upstream 1000 false Scaffold00310: 296007-297006 Manihot esculenta
Manes.S002100 1.0kb downstream 1.0kb downstream 5497 true Scaffold00310: 297007-302503 Manihot esculenta
Manes.S002100 1.0kb downstream 1.0kb downstream 1000 false Scaffold00310: 301504-302503 Manihot esculenta
Manes.S002100 2.0kb upstream 2.0kb upstream 6497 true Scaffold00310: 295007-301503 Manihot esculenta
Manes.S002100 2.0kb upstream 2.0kb upstream 2000 false Scaffold00310: 295007-297006 Manihot esculenta
Manes.S002100 2.0kb downstream 2.0kb downstream 6497 true Scaffold00310: 297007-303503 Manihot esculenta
Manes.S002100 2.0kb downstream 2.0kb downstream 2000 false Scaffold00310: 301504-303503 Manihot esculenta
Manes.S002100 5.0kb upstream 5.0kb upstream 9497 true Scaffold00310: 292007-301503 Manihot esculenta
Manes.S002100 5.0kb upstream 5.0kb upstream 5000 false Scaffold00310: 292007-297006 Manihot esculenta
Manes.S002100 5.0kb downstream 5.0kb downstream 9497 true Scaffold00310: 297007-306503 Manihot esculenta
Manes.S002100 5.0kb downstream 5.0kb downstream 5000 false Scaffold00310: 301504-306503 Manihot esculenta
Manes.S002100 10.0kb upstream 10.0kb upstream 14497 true Scaffold00310: 287007-301503 Manihot esculenta
Manes.S002100 10.0kb upstream 10.0kb upstream 10000 false Scaffold00310: 287007-297006 Manihot esculenta
Manes.S002100 10.0kb downstream 10.0kb downstream 14497 true Scaffold00310: 297007-311503 Manihot esculenta
Manes.S002100 10.0kb downstream 10.0kb downstream 10000 false Scaffold00310: 301504-311503 Manihot esculenta

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122449738 5262 Malpighiales View MSA
124243364 5268 Malvidae View MSA
124061653 5270 Rosid View MSA
123740208 5271 Pentapetalae View MSA
122785704 5272 Eudicot View MSA
122047257 5273 Angiosperm View MSA
121347599 5274 Embryophyte View MSA
123423863 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain