Gene : Manes.S008500 M. esculenta v6.1
Defline:  (1 of 2) PTHR31339:SF3 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN Genomic Order:  2
Name:  ? Manes.S008500 Secondary Identifier:  ? PAC:32368890
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Manes.S008500 0.5kb upstream 0.5kb upstream 7377 true Scaffold00360: 231008-238384 Manihot esculenta
Manes.S008500 0.5kb upstream 0.5kb upstream 500 false Scaffold00360: 231008-231507 Manihot esculenta
Manes.S008500 0.5kb downstream 0.5kb downstream 7377 true Scaffold00360: 231508-238884 Manihot esculenta
Manes.S008500 0.5kb downstream 0.5kb downstream 500 false Scaffold00360: 238385-238884 Manihot esculenta
Manes.S008500 1.0kb upstream 1.0kb upstream 7877 true Scaffold00360: 230508-238384 Manihot esculenta
Manes.S008500 1.0kb upstream 1.0kb upstream 1000 false Scaffold00360: 230508-231507 Manihot esculenta
Manes.S008500 1.0kb downstream 1.0kb downstream 7877 true Scaffold00360: 231508-239384 Manihot esculenta
Manes.S008500 1.0kb downstream 1.0kb downstream 1000 false Scaffold00360: 238385-239384 Manihot esculenta
Manes.S008500 2.0kb upstream 2.0kb upstream 8877 true Scaffold00360: 229508-238384 Manihot esculenta
Manes.S008500 2.0kb upstream 2.0kb upstream 2000 false Scaffold00360: 229508-231507 Manihot esculenta
Manes.S008500 2.0kb downstream 2.0kb downstream 8877 true Scaffold00360: 231508-240384 Manihot esculenta
Manes.S008500 2.0kb downstream 2.0kb downstream 2000 false Scaffold00360: 238385-240384 Manihot esculenta
Manes.S008500 5.0kb upstream 5.0kb upstream 11877 true Scaffold00360: 226508-238384 Manihot esculenta
Manes.S008500 5.0kb upstream 5.0kb upstream 5000 false Scaffold00360: 226508-231507 Manihot esculenta
Manes.S008500 5.0kb downstream 5.0kb downstream 11877 true Scaffold00360: 231508-243384 Manihot esculenta
Manes.S008500 5.0kb downstream 5.0kb downstream 5000 false Scaffold00360: 238385-243384 Manihot esculenta
Manes.S008500 10.0kb upstream 10.0kb upstream 16877 true Scaffold00360: 221508-238384 Manihot esculenta
Manes.S008500 10.0kb upstream 10.0kb upstream 10000 false Scaffold00360: 221508-231507 Manihot esculenta
Manes.S008500 10.0kb downstream 10.0kb downstream 16877 true Scaffold00360: 231508-248384 Manihot esculenta
Manes.S008500 10.0kb downstream 10.0kb downstream 10000 false Scaffold00360: 238385-248384 Manihot esculenta

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122462330 5262 Malpighiales View MSA
124240679 5268 Malvidae View MSA
124068790 5270 Rosid View MSA
123750748 5271 Pentapetalae View MSA
122786730 5272 Eudicot View MSA
122043550 5273 Angiosperm View MSA
121310146 5274 Embryophyte View MSA
123347715 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain