Gene : Manes.S042600 M. esculenta v6.1

Defline:  (1 of 10) PF07939 - Protein of unknown function (DUF1685) (DUF1685) Genomic Order:  2
Name:  ? Manes.S042600 Secondary Identifier:  ? PAC:32339636

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Manes.S042600 0.5kb upstream 0.5kb upstream 1817 true Scaffold00915: 34899-36715 Manihot esculenta
Manes.S042600 0.5kb upstream 0.5kb upstream 500 false Scaffold00915: 34899-35398 Manihot esculenta
Manes.S042600 0.5kb downstream 0.5kb downstream 1817 true Scaffold00915: 35399-37215 Manihot esculenta
Manes.S042600 0.5kb downstream 0.5kb downstream 500 false Scaffold00915: 36716-37215 Manihot esculenta
Manes.S042600 1.0kb upstream 1.0kb upstream 2317 true Scaffold00915: 34399-36715 Manihot esculenta
Manes.S042600 1.0kb upstream 1.0kb upstream 1000 false Scaffold00915: 34399-35398 Manihot esculenta
Manes.S042600 1.0kb downstream 1.0kb downstream 2317 true Scaffold00915: 35399-37715 Manihot esculenta
Manes.S042600 1.0kb downstream 1.0kb downstream 1000 false Scaffold00915: 36716-37715 Manihot esculenta
Manes.S042600 2.0kb upstream 2.0kb upstream 3317 true Scaffold00915: 33399-36715 Manihot esculenta
Manes.S042600 2.0kb upstream 2.0kb upstream 2000 false Scaffold00915: 33399-35398 Manihot esculenta
Manes.S042600 2.0kb downstream 2.0kb downstream 3317 true Scaffold00915: 35399-38715 Manihot esculenta
Manes.S042600 2.0kb downstream 2.0kb downstream 2000 false Scaffold00915: 36716-38715 Manihot esculenta
Manes.S042600 5.0kb upstream 5.0kb upstream 6317 true Scaffold00915: 30399-36715 Manihot esculenta
Manes.S042600 5.0kb upstream 5.0kb upstream 5000 false Scaffold00915: 30399-35398 Manihot esculenta
Manes.S042600 5.0kb downstream 5.0kb downstream 6317 true Scaffold00915: 35399-41715 Manihot esculenta
Manes.S042600 5.0kb downstream 5.0kb downstream 5000 false Scaffold00915: 36716-41715 Manihot esculenta
Manes.S042600 10.0kb upstream 10.0kb upstream 11317 true Scaffold00915: 25399-36715 Manihot esculenta
Manes.S042600 10.0kb upstream 10.0kb upstream 10000 false Scaffold00915: 25399-35398 Manihot esculenta
Manes.S042600 10.0kb downstream 10.0kb downstream 11317 true Scaffold00915: 35399-46715 Manihot esculenta
Manes.S042600 10.0kb downstream 10.0kb downstream 10000 false Scaffold00915: 36716-46715 Manihot esculenta

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122457458 5262 Malpighiales View MSA
124250644 5268 Malvidae View MSA
124069452 5270 Rosid View MSA
123750929 5271 Pentapetalae View MSA
122791685 5272 Eudicot View MSA
122049141 5273 Angiosperm View MSA
121350568 5274 Embryophyte View MSA
123381799 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain