Gene : Pahal.A02300 P. hallii v2.0
Defline:  (1 of 1) K14759 - isochorismate synthase / 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase / 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase / O-succinylbenzoate synthase (PHYLLO) Genomic Order:  2375
Name:  ? Pahal.A02300 Secondary Identifier:  ? PAC:32530386
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Phallii PWY-5837 Panicum hallii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pahal.A02300 0.5kb upstream 0.5kb upstream 12974 true Chr01: 48079820-48092793 Panicum hallii
Pahal.A02300 0.5kb upstream 0.5kb upstream 500 false Chr01: 48079820-48080319 Panicum hallii
Pahal.A02300 0.5kb downstream 0.5kb downstream 12974 true Chr01: 48080320-48093293 Panicum hallii
Pahal.A02300 0.5kb downstream 0.5kb downstream 500 false Chr01: 48092794-48093293 Panicum hallii
Pahal.A02300 1.0kb upstream 1.0kb upstream 13474 true Chr01: 48079320-48092793 Panicum hallii
Pahal.A02300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 48079320-48080319 Panicum hallii
Pahal.A02300 1.0kb downstream 1.0kb downstream 13474 true Chr01: 48080320-48093793 Panicum hallii
Pahal.A02300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 48092794-48093793 Panicum hallii
Pahal.A02300 2.0kb upstream 2.0kb upstream 14474 true Chr01: 48078320-48092793 Panicum hallii
Pahal.A02300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 48078320-48080319 Panicum hallii
Pahal.A02300 2.0kb downstream 2.0kb downstream 14474 true Chr01: 48080320-48094793 Panicum hallii
Pahal.A02300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 48092794-48094793 Panicum hallii
Pahal.A02300 5.0kb upstream 5.0kb upstream 17474 true Chr01: 48075320-48092793 Panicum hallii
Pahal.A02300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 48075320-48080319 Panicum hallii
Pahal.A02300 5.0kb downstream 5.0kb downstream 17474 true Chr01: 48080320-48097793 Panicum hallii
Pahal.A02300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 48092794-48097793 Panicum hallii
Pahal.A02300 10.0kb upstream 10.0kb upstream 22474 true Chr01: 48070320-48092793 Panicum hallii
Pahal.A02300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 48070320-48080319 Panicum hallii
Pahal.A02300 10.0kb downstream 10.0kb downstream 22474 true Chr01: 48080320-48102793 Panicum hallii
Pahal.A02300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 48092794-48102793 Panicum hallii

0 Protein Family

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.635        
cufflinks 0.223     Low Low
cufflinks 0.348        
cufflinks 0.159     Low Low
cufflinks 0.719        
cufflinks 3.772        
cufflinks 2.7        
cufflinks 3.859        
cufflinks 4.149        

0 Strain