Protein Domain : IPR023330

Type:  Domain Name:  Rhabdovirus nucleocapsid, N-terminal
Description:  All negative-strand RNA viruses contain a ribonucleoprotein (RNP) complex that consists of the viral genome RNA completely enwrapped by the nucleoprotein (N). The crystal structure of the N protein in complex with a single-strand RNA has been determined for two members of the rhabdovirus family, VSV [] and RABV []. The regions in contact with RNA were mapped to a cavity formed between two structural lobes of the nucleoprotein: the N-terminal arm and the extended loop in the C-terminal lobe [].This entry represents the N-terminal domain. Short Name:  Rhabdovirus_ncapsid_N

0 Child Features

0 Contains

1 Cross References

Identifier
G3DSA:1.10.3570.10

0 Found In

0 GO Annotation

0 Ontology Annotations

0 Parent Features

74 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
Pahal.I04256.1 A0A2S3IP59 PAC:32504648 Panicum hallii 1788  
Pahal.A03022.1 A0A2S3GSM1 PAC:32527144 Panicum hallii 357  
Sevir.1G288400.1.p A0A4U6WE20 PAC:32663671 Setaria viridis 362  
Sevir.1G288400.2.p A0A4U6WI98 PAC:32663672 Setaria viridis 361  
Seita.1G283000.1.p A0A368PSE6 PAC:32697732 Setaria italica 361  
Aqcoe6G168800.2.p PAC:33065536 Aquilegia coerulea 504  
Aqcoe6G168800.1.p A0A2G5DT11 PAC:33065535 Aquilegia coerulea 547  
Brdisv1Adi-101034010m.p PAC:35728360 Brachypodium distachyon Adi-10 163  
Oropetium_20150105_19361A PAC:36003396 Oropetium thomaeum 356  
AUR62023759-RA PAC:36281881 Chenopodium quinoa 296  
Zm00008a025655_P01 PAC:37219300 Zea mays PH207 972  
Potri.003G061600.1.p A0A2K2B2B9 PAC:37236677 Populus trichocarpa 280  
Podel.03G064000.1.p PAC:37324720 Populus deltoides WV94 159  
PGSC0003DMP400033086 PAC:37446711 Solanum tuberosum 473  
PGSC0003DMP400005684 PAC:37462607 Solanum tuberosum 120  
Pavir.9KG307200.1.p PAC:37673984 Panicum virgatum 1771  
Pavir.5NG365100.1.p PAC:37576065 Panicum virgatum 478  
Pavir.1KG461000.1.p PAC:37665602 Panicum virgatum 358  
Pavir.1KG461000.2.p PAC:37665603 Panicum virgatum 357  
Pavir.1NG437700.1.p PAC:37615424 Panicum virgatum 359  
Oeu007474.1 PAC:37724450 Olea europaea 2484  
Oeu037653.1 PAC:37743566 Olea europaea 1464  
evm.model.Scaffold_370.237 PAC:37847146 Coffea arabica 559  
HORVU0Hr1G004800.2 PAC:38342716 Hordeum vulgare 225  
Lsat_1_v5_gn_1_61481.1 A0A2J6K632 PAC:38942241 Lactuca sativa 111  
Alyli.0083s0083.1.p PAC:39163233 Alyssum linifolium 272  
Eruve.0107s0009.1.p PAC:39883060 Eruca vesicaria 99  
Crahi.1271s0004.1.p PAC:39978778 Crambe hispanica 741  
Crahi.0173s0014.1.p PAC:39979951 Crambe hispanica 529  
Crahi.0377s0019.1.p PAC:39997423 Crambe hispanica 369  

3 Publications

First Author Title Year Journal Volume Pages PubMed ID
            16778022
            16778023
            18003727