Gene : Sphfalx0073s0013 S. fallax v0.5
Defline:  (1 of 1) PF00078//PF00385//PF03732//PF09337//PF13650 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) // Chromo (CHRromatin Organisation MOdifier) domain (Chromo) // Retrotransposon gag protein (Retrotrans_gag) // His(2)-Cys(2) zinc finger (zf-H2C2) // Aspartyl protease (Asp_protease_2) Genomic Order:  13
Name:  ? Sphfalx0073s0013 Secondary Identifier:  ? PAC:32615635
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sphfalx0073s0013 0.5kb upstream 0.5kb upstream 4976 true super_73: 150682-155657 Sphagnum fallax
Sphfalx0073s0013 0.5kb upstream 0.5kb upstream 500 false super_73: 150682-151181 Sphagnum fallax
Sphfalx0073s0013 0.5kb downstream 0.5kb downstream 4976 true super_73: 151182-156157 Sphagnum fallax
Sphfalx0073s0013 0.5kb downstream 0.5kb downstream 500 false super_73: 155658-156157 Sphagnum fallax
Sphfalx0073s0013 1.0kb upstream 1.0kb upstream 5476 true super_73: 150182-155657 Sphagnum fallax
Sphfalx0073s0013 1.0kb upstream 1.0kb upstream 1000 false super_73: 150182-151181 Sphagnum fallax
Sphfalx0073s0013 1.0kb downstream 1.0kb downstream 5476 true super_73: 151182-156657 Sphagnum fallax
Sphfalx0073s0013 1.0kb downstream 1.0kb downstream 1000 false super_73: 155658-156657 Sphagnum fallax
Sphfalx0073s0013 2.0kb upstream 2.0kb upstream 6476 true super_73: 149182-155657 Sphagnum fallax
Sphfalx0073s0013 2.0kb upstream 2.0kb upstream 2000 false super_73: 149182-151181 Sphagnum fallax
Sphfalx0073s0013 2.0kb downstream 2.0kb downstream 6476 true super_73: 151182-157657 Sphagnum fallax
Sphfalx0073s0013 2.0kb downstream 2.0kb downstream 2000 false super_73: 155658-157657 Sphagnum fallax
Sphfalx0073s0013 5.0kb upstream 5.0kb upstream 9476 true super_73: 146182-155657 Sphagnum fallax
Sphfalx0073s0013 5.0kb upstream 5.0kb upstream 5000 false super_73: 146182-151181 Sphagnum fallax
Sphfalx0073s0013 5.0kb downstream 5.0kb downstream 9476 true super_73: 151182-160657 Sphagnum fallax
Sphfalx0073s0013 5.0kb downstream 5.0kb downstream 5000 false super_73: 155658-160657 Sphagnum fallax
Sphfalx0073s0013 10.0kb upstream 10.0kb upstream 14476 true super_73: 141182-155657 Sphagnum fallax
Sphfalx0073s0013 10.0kb upstream 10.0kb upstream 10000 false super_73: 141182-151181 Sphagnum fallax
Sphfalx0073s0013 10.0kb downstream 10.0kb downstream 14476 true super_73: 151182-165657 Sphagnum fallax
Sphfalx0073s0013 10.0kb downstream 10.0kb downstream 10000 false super_73: 155658-165657 Sphagnum fallax

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123429154 5275 Viridiplantae View MSA
121351706 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain