Gene : Sphfalx0034s0185 S. fallax v0.5
Defline:  (1 of 2) PF05834 - Lycopene cyclase protein (Lycopene_cycl) Genomic Order:  185
Name:  ? Sphfalx0034s0185 Secondary Identifier:  ? PAC:32628752
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sfallax CAROTENOID-PWY Sphagnum fallax pathologic  
Sfallax PWY-5946 Sphagnum fallax pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sphfalx0034s0185 0.5kb upstream 0.5kb upstream 5336 true super_34: 2407676-2413011 Sphagnum fallax
Sphfalx0034s0185 0.5kb upstream 0.5kb upstream 500 false super_34: 2407676-2408175 Sphagnum fallax
Sphfalx0034s0185 0.5kb downstream 0.5kb downstream 5336 true super_34: 2408176-2413511 Sphagnum fallax
Sphfalx0034s0185 0.5kb downstream 0.5kb downstream 500 false super_34: 2413012-2413511 Sphagnum fallax
Sphfalx0034s0185 1.0kb upstream 1.0kb upstream 5836 true super_34: 2407176-2413011 Sphagnum fallax
Sphfalx0034s0185 1.0kb upstream 1.0kb upstream 1000 false super_34: 2407176-2408175 Sphagnum fallax
Sphfalx0034s0185 1.0kb downstream 1.0kb downstream 5836 true super_34: 2408176-2414011 Sphagnum fallax
Sphfalx0034s0185 1.0kb downstream 1.0kb downstream 1000 false super_34: 2413012-2414011 Sphagnum fallax
Sphfalx0034s0185 2.0kb upstream 2.0kb upstream 6836 true super_34: 2406176-2413011 Sphagnum fallax
Sphfalx0034s0185 2.0kb upstream 2.0kb upstream 2000 false super_34: 2406176-2408175 Sphagnum fallax
Sphfalx0034s0185 2.0kb downstream 2.0kb downstream 6836 true super_34: 2408176-2415011 Sphagnum fallax
Sphfalx0034s0185 2.0kb downstream 2.0kb downstream 2000 false super_34: 2413012-2415011 Sphagnum fallax
Sphfalx0034s0185 5.0kb upstream 5.0kb upstream 9836 true super_34: 2403176-2413011 Sphagnum fallax
Sphfalx0034s0185 5.0kb upstream 5.0kb upstream 5000 false super_34: 2403176-2408175 Sphagnum fallax
Sphfalx0034s0185 5.0kb downstream 5.0kb downstream 9836 true super_34: 2408176-2418011 Sphagnum fallax
Sphfalx0034s0185 5.0kb downstream 5.0kb downstream 5000 false super_34: 2413012-2418011 Sphagnum fallax
Sphfalx0034s0185 10.0kb upstream 10.0kb upstream 14836 true super_34: 2398176-2413011 Sphagnum fallax
Sphfalx0034s0185 10.0kb upstream 10.0kb upstream 10000 false super_34: 2398176-2408175 Sphagnum fallax
Sphfalx0034s0185 10.0kb downstream 10.0kb downstream 14836 true super_34: 2408176-2423011 Sphagnum fallax
Sphfalx0034s0185 10.0kb downstream 10.0kb downstream 10000 false super_34: 2413012-2423011 Sphagnum fallax

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121345455 5274 Embryophyte View MSA
123424108 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain