Gene : Sphfalx0105s0001 S. fallax v0.5
Defline:  (1 of 19) PF00078//PF00385//PF00665//PF09337 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) // Chromo (CHRromatin Organisation MOdifier) domain (Chromo) // Integrase core domain (rve) // His(2)-Cys(2) zinc finger (zf-H2C2) Genomic Order:  1
Name:  ? Sphfalx0105s0001 Secondary Identifier:  ? PAC:32631973
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sphfalx0105s0001 0.5kb upstream 0.5kb upstream 3606 true super_105: 1925-5530 Sphagnum fallax
Sphfalx0105s0001 0.5kb upstream 0.5kb upstream 500 false super_105: 1925-2424 Sphagnum fallax
Sphfalx0105s0001 0.5kb downstream 0.5kb downstream 3606 true super_105: 2425-6030 Sphagnum fallax
Sphfalx0105s0001 0.5kb downstream 0.5kb downstream 500 false super_105: 5531-6030 Sphagnum fallax
Sphfalx0105s0001 1.0kb upstream 1.0kb upstream 4106 true super_105: 1425-5530 Sphagnum fallax
Sphfalx0105s0001 1.0kb upstream 1.0kb upstream 1000 false super_105: 1425-2424 Sphagnum fallax
Sphfalx0105s0001 1.0kb downstream 1.0kb downstream 4106 true super_105: 2425-6530 Sphagnum fallax
Sphfalx0105s0001 1.0kb downstream 1.0kb downstream 1000 false super_105: 5531-6530 Sphagnum fallax
Sphfalx0105s0001 2.0kb upstream 2.0kb upstream 5106 true super_105: 425-5530 Sphagnum fallax
Sphfalx0105s0001 2.0kb upstream 2.0kb upstream 2000 false super_105: 425-2424 Sphagnum fallax
Sphfalx0105s0001 2.0kb downstream 2.0kb downstream 5106 true super_105: 2425-7530 Sphagnum fallax
Sphfalx0105s0001 2.0kb downstream 2.0kb downstream 2000 false super_105: 5531-7530 Sphagnum fallax
Sphfalx0105s0001 5.0kb upstream 5.0kb upstream 5530 true super_105: 1-5530 Sphagnum fallax
Sphfalx0105s0001 5.0kb upstream 5.0kb upstream 2424 false super_105: 1-2424 Sphagnum fallax
Sphfalx0105s0001 5.0kb downstream 5.0kb downstream 8106 true super_105: 2425-10530 Sphagnum fallax
Sphfalx0105s0001 5.0kb downstream 5.0kb downstream 5000 false super_105: 5531-10530 Sphagnum fallax
Sphfalx0105s0001 10.0kb upstream 10.0kb upstream 5530 true super_105: 1-5530 Sphagnum fallax
Sphfalx0105s0001 10.0kb upstream 10.0kb upstream 2424 false super_105: 1-2424 Sphagnum fallax
Sphfalx0105s0001 10.0kb downstream 10.0kb downstream 13106 true super_105: 2425-15530 Sphagnum fallax
Sphfalx0105s0001 10.0kb downstream 10.0kb downstream 10000 false super_105: 5531-15530 Sphagnum fallax

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123429154 5275 Viridiplantae View MSA
121351706 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain