Gene : Sphfalx0001s0195 S. fallax v0.5
Defline:  (1 of 2) PF05834 - Lycopene cyclase protein (Lycopene_cycl) Genomic Order:  195
Name:  ? Sphfalx0001s0195 Secondary Identifier:  ? PAC:32605263
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sfallax CAROTENOID-PWY Sphagnum fallax pathologic  
Sfallax PWY-5943 Sphagnum fallax pathologic  
Sfallax PWY-5947 Sphagnum fallax pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sphfalx0001s0195 0.5kb upstream 0.5kb upstream 4582 true super_1: 3259145-3263726 Sphagnum fallax
Sphfalx0001s0195 0.5kb upstream 0.5kb upstream 500 false super_1: 3263227-3263726 Sphagnum fallax
Sphfalx0001s0195 0.5kb downstream 0.5kb downstream 4582 true super_1: 3258645-3263226 Sphagnum fallax
Sphfalx0001s0195 0.5kb downstream 0.5kb downstream 500 false super_1: 3258645-3259144 Sphagnum fallax
Sphfalx0001s0195 1.0kb upstream 1.0kb upstream 5082 true super_1: 3259145-3264226 Sphagnum fallax
Sphfalx0001s0195 1.0kb upstream 1.0kb upstream 1000 false super_1: 3263227-3264226 Sphagnum fallax
Sphfalx0001s0195 1.0kb downstream 1.0kb downstream 5082 true super_1: 3258145-3263226 Sphagnum fallax
Sphfalx0001s0195 1.0kb downstream 1.0kb downstream 1000 false super_1: 3258145-3259144 Sphagnum fallax
Sphfalx0001s0195 2.0kb upstream 2.0kb upstream 6082 true super_1: 3259145-3265226 Sphagnum fallax
Sphfalx0001s0195 2.0kb upstream 2.0kb upstream 2000 false super_1: 3263227-3265226 Sphagnum fallax
Sphfalx0001s0195 2.0kb downstream 2.0kb downstream 6082 true super_1: 3257145-3263226 Sphagnum fallax
Sphfalx0001s0195 2.0kb downstream 2.0kb downstream 2000 false super_1: 3257145-3259144 Sphagnum fallax
Sphfalx0001s0195 5.0kb upstream 5.0kb upstream 9082 true super_1: 3259145-3268226 Sphagnum fallax
Sphfalx0001s0195 5.0kb upstream 5.0kb upstream 5000 false super_1: 3263227-3268226 Sphagnum fallax
Sphfalx0001s0195 5.0kb downstream 5.0kb downstream 9082 true super_1: 3254145-3263226 Sphagnum fallax
Sphfalx0001s0195 5.0kb downstream 5.0kb downstream 5000 false super_1: 3254145-3259144 Sphagnum fallax
Sphfalx0001s0195 10.0kb upstream 10.0kb upstream 14082 true super_1: 3259145-3273226 Sphagnum fallax
Sphfalx0001s0195 10.0kb upstream 10.0kb upstream 10000 false super_1: 3263227-3273226 Sphagnum fallax
Sphfalx0001s0195 10.0kb downstream 10.0kb downstream 14082 true super_1: 3249145-3263226 Sphagnum fallax
Sphfalx0001s0195 10.0kb downstream 10.0kb downstream 10000 false super_1: 3249145-3259144 Sphagnum fallax

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121345644 5274 Embryophyte View MSA
123423874 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain