Gene : Sphfalx0166s0028 S. fallax v0.5
Defline:  (1 of 7) PTHR32098:SF5 - LYCOPENE BETA/EPSILON CYCLASE PROTEIN Genomic Order:  28
Name:  ? Sphfalx0166s0028 Secondary Identifier:  ? PAC:32619591
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sfallax CAROTENOID-PWY Sphagnum fallax pathologic  
Sfallax PWY-5943 Sphagnum fallax pathologic  
Sfallax PWY-5947 Sphagnum fallax pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sphfalx0166s0028 0.5kb upstream 0.5kb upstream 6483 true super_166: 454246-460728 Sphagnum fallax
Sphfalx0166s0028 0.5kb upstream 0.5kb upstream 500 false super_166: 460229-460728 Sphagnum fallax
Sphfalx0166s0028 0.5kb downstream 0.5kb downstream 6483 true super_166: 453746-460228 Sphagnum fallax
Sphfalx0166s0028 0.5kb downstream 0.5kb downstream 500 false super_166: 453746-454245 Sphagnum fallax
Sphfalx0166s0028 1.0kb upstream 1.0kb upstream 6983 true super_166: 454246-461228 Sphagnum fallax
Sphfalx0166s0028 1.0kb upstream 1.0kb upstream 1000 false super_166: 460229-461228 Sphagnum fallax
Sphfalx0166s0028 1.0kb downstream 1.0kb downstream 6983 true super_166: 453246-460228 Sphagnum fallax
Sphfalx0166s0028 1.0kb downstream 1.0kb downstream 1000 false super_166: 453246-454245 Sphagnum fallax
Sphfalx0166s0028 2.0kb upstream 2.0kb upstream 7983 true super_166: 454246-462228 Sphagnum fallax
Sphfalx0166s0028 2.0kb upstream 2.0kb upstream 2000 false super_166: 460229-462228 Sphagnum fallax
Sphfalx0166s0028 2.0kb downstream 2.0kb downstream 7983 true super_166: 452246-460228 Sphagnum fallax
Sphfalx0166s0028 2.0kb downstream 2.0kb downstream 2000 false super_166: 452246-454245 Sphagnum fallax
Sphfalx0166s0028 5.0kb upstream 5.0kb upstream 10983 true super_166: 454246-465228 Sphagnum fallax
Sphfalx0166s0028 5.0kb upstream 5.0kb upstream 5000 false super_166: 460229-465228 Sphagnum fallax
Sphfalx0166s0028 5.0kb downstream 5.0kb downstream 10983 true super_166: 449246-460228 Sphagnum fallax
Sphfalx0166s0028 5.0kb downstream 5.0kb downstream 5000 false super_166: 449246-454245 Sphagnum fallax
Sphfalx0166s0028 10.0kb upstream 10.0kb upstream 15983 true super_166: 454246-470228 Sphagnum fallax
Sphfalx0166s0028 10.0kb upstream 10.0kb upstream 10000 false super_166: 460229-470228 Sphagnum fallax
Sphfalx0166s0028 10.0kb downstream 10.0kb downstream 15983 true super_166: 444246-460228 Sphagnum fallax
Sphfalx0166s0028 10.0kb downstream 10.0kb downstream 10000 false super_166: 444246-454245 Sphagnum fallax

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121350076 5274 Embryophyte View MSA
123425500 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain