Gene : Sphfalx0027s0165 S. fallax v0.5
Defline:  (1 of 1) PTHR10668:SF5 - BIOGENESIS OF LYSOSOME-RELATED ORGANELLES COMPLEX 1 SUBUNIT 2 Genomic Order:  165
Name:  ? Sphfalx0027s0165 Secondary Identifier:  ? PAC:32607915
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sfallax CAROTENOID-PWY Sphagnum fallax pathologic  
Sfallax PWY-6475 Sphagnum fallax pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sphfalx0027s0165 0.5kb upstream 0.5kb upstream 6408 true super_27: 2347278-2353685 Sphagnum fallax
Sphfalx0027s0165 0.5kb upstream 0.5kb upstream 500 false super_27: 2353186-2353685 Sphagnum fallax
Sphfalx0027s0165 0.5kb downstream 0.5kb downstream 6408 true super_27: 2346778-2353185 Sphagnum fallax
Sphfalx0027s0165 0.5kb downstream 0.5kb downstream 500 false super_27: 2346778-2347277 Sphagnum fallax
Sphfalx0027s0165 1.0kb upstream 1.0kb upstream 6908 true super_27: 2347278-2354185 Sphagnum fallax
Sphfalx0027s0165 1.0kb upstream 1.0kb upstream 1000 false super_27: 2353186-2354185 Sphagnum fallax
Sphfalx0027s0165 1.0kb downstream 1.0kb downstream 6908 true super_27: 2346278-2353185 Sphagnum fallax
Sphfalx0027s0165 1.0kb downstream 1.0kb downstream 1000 false super_27: 2346278-2347277 Sphagnum fallax
Sphfalx0027s0165 2.0kb upstream 2.0kb upstream 7908 true super_27: 2347278-2355185 Sphagnum fallax
Sphfalx0027s0165 2.0kb upstream 2.0kb upstream 2000 false super_27: 2353186-2355185 Sphagnum fallax
Sphfalx0027s0165 2.0kb downstream 2.0kb downstream 7908 true super_27: 2345278-2353185 Sphagnum fallax
Sphfalx0027s0165 2.0kb downstream 2.0kb downstream 2000 false super_27: 2345278-2347277 Sphagnum fallax
Sphfalx0027s0165 5.0kb upstream 5.0kb upstream 10908 true super_27: 2347278-2358185 Sphagnum fallax
Sphfalx0027s0165 5.0kb upstream 5.0kb upstream 5000 false super_27: 2353186-2358185 Sphagnum fallax
Sphfalx0027s0165 5.0kb downstream 5.0kb downstream 10908 true super_27: 2342278-2353185 Sphagnum fallax
Sphfalx0027s0165 5.0kb downstream 5.0kb downstream 5000 false super_27: 2342278-2347277 Sphagnum fallax
Sphfalx0027s0165 10.0kb upstream 10.0kb upstream 15908 true super_27: 2347278-2363185 Sphagnum fallax
Sphfalx0027s0165 10.0kb upstream 10.0kb upstream 10000 false super_27: 2353186-2363185 Sphagnum fallax
Sphfalx0027s0165 10.0kb downstream 10.0kb downstream 15908 true super_27: 2337278-2353185 Sphagnum fallax
Sphfalx0027s0165 10.0kb downstream 10.0kb downstream 10000 false super_27: 2337278-2347277 Sphagnum fallax

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121345795 5274 Embryophyte View MSA
123425130 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain