Gene : Sevir.3G008400 S. viridis v1.1
Defline:  (1 of 2) PTHR22849//PTHR22849:SF10 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  84
Name:  ? Sevir.3G008400 Secondary Identifier:  ? PAC:32677447
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY-7511 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.3G008400 0.5kb upstream 0.5kb upstream 2254 true Chr_03: 511931-514184 Setaria viridis
Sevir.3G008400 0.5kb upstream 0.5kb upstream 500 false Chr_03: 511931-512430 Setaria viridis
Sevir.3G008400 0.5kb downstream 0.5kb downstream 2254 true Chr_03: 512431-514684 Setaria viridis
Sevir.3G008400 0.5kb downstream 0.5kb downstream 500 false Chr_03: 514185-514684 Setaria viridis
Sevir.3G008400 1.0kb upstream 1.0kb upstream 2754 true Chr_03: 511431-514184 Setaria viridis
Sevir.3G008400 1.0kb upstream 1.0kb upstream 1000 false Chr_03: 511431-512430 Setaria viridis
Sevir.3G008400 1.0kb downstream 1.0kb downstream 2754 true Chr_03: 512431-515184 Setaria viridis
Sevir.3G008400 1.0kb downstream 1.0kb downstream 1000 false Chr_03: 514185-515184 Setaria viridis
Sevir.3G008400 2.0kb upstream 2.0kb upstream 3754 true Chr_03: 510431-514184 Setaria viridis
Sevir.3G008400 2.0kb upstream 2.0kb upstream 2000 false Chr_03: 510431-512430 Setaria viridis
Sevir.3G008400 2.0kb downstream 2.0kb downstream 3754 true Chr_03: 512431-516184 Setaria viridis
Sevir.3G008400 2.0kb downstream 2.0kb downstream 2000 false Chr_03: 514185-516184 Setaria viridis
Sevir.3G008400 5.0kb upstream 5.0kb upstream 6754 true Chr_03: 507431-514184 Setaria viridis
Sevir.3G008400 5.0kb upstream 5.0kb upstream 5000 false Chr_03: 507431-512430 Setaria viridis
Sevir.3G008400 5.0kb downstream 5.0kb downstream 6754 true Chr_03: 512431-519184 Setaria viridis
Sevir.3G008400 5.0kb downstream 5.0kb downstream 5000 false Chr_03: 514185-519184 Setaria viridis
Sevir.3G008400 10.0kb upstream 10.0kb upstream 11754 true Chr_03: 502431-514184 Setaria viridis
Sevir.3G008400 10.0kb upstream 10.0kb upstream 10000 false Chr_03: 502431-512430 Setaria viridis
Sevir.3G008400 10.0kb downstream 10.0kb downstream 11754 true Chr_03: 512431-524184 Setaria viridis
Sevir.3G008400 10.0kb downstream 10.0kb downstream 10000 false Chr_03: 514185-524184 Setaria viridis

0 Protein Family

19 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.373       Low
cufflinks 2.148        
cufflinks 1.458        
cufflinks 0.928        
cufflinks 2.313        
cufflinks 1.64        
cufflinks 0.688        
cufflinks 1.386        
cufflinks 1.648        
cufflinks 1.067        
cufflinks 1.545        
cufflinks 0.807        
cufflinks 0.124       Low
cufflinks 2.864       High
cufflinks 2.576       High
cufflinks 2.094        
cufflinks 0.78        
cufflinks 1.2        
cufflinks 1.016        

0 Strain