Gene : Sevir.3G013700 S. viridis v1.1
Defline:  (1 of 7) 6.1.1.9 - Valine--tRNA ligase / Valyl-tRNA synthetase Genomic Order:  137
Name:  ? Sevir.3G013700 Secondary Identifier:  ? PAC:32675389
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis TRNA-CHARGING-PWY Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.3G013700 0.5kb upstream 0.5kb upstream 2652 true Chr_03: 791046-793697 Setaria viridis
Sevir.3G013700 0.5kb upstream 0.5kb upstream 500 false Chr_03: 791046-791545 Setaria viridis
Sevir.3G013700 0.5kb downstream 0.5kb downstream 2652 true Chr_03: 791546-794197 Setaria viridis
Sevir.3G013700 0.5kb downstream 0.5kb downstream 500 false Chr_03: 793698-794197 Setaria viridis
Sevir.3G013700 1.0kb upstream 1.0kb upstream 3152 true Chr_03: 790546-793697 Setaria viridis
Sevir.3G013700 1.0kb upstream 1.0kb upstream 1000 false Chr_03: 790546-791545 Setaria viridis
Sevir.3G013700 1.0kb downstream 1.0kb downstream 3152 true Chr_03: 791546-794697 Setaria viridis
Sevir.3G013700 1.0kb downstream 1.0kb downstream 1000 false Chr_03: 793698-794697 Setaria viridis
Sevir.3G013700 2.0kb upstream 2.0kb upstream 4152 true Chr_03: 789546-793697 Setaria viridis
Sevir.3G013700 2.0kb upstream 2.0kb upstream 2000 false Chr_03: 789546-791545 Setaria viridis
Sevir.3G013700 2.0kb downstream 2.0kb downstream 4152 true Chr_03: 791546-795697 Setaria viridis
Sevir.3G013700 2.0kb downstream 2.0kb downstream 2000 false Chr_03: 793698-795697 Setaria viridis
Sevir.3G013700 5.0kb upstream 5.0kb upstream 7152 true Chr_03: 786546-793697 Setaria viridis
Sevir.3G013700 5.0kb upstream 5.0kb upstream 5000 false Chr_03: 786546-791545 Setaria viridis
Sevir.3G013700 5.0kb downstream 5.0kb downstream 7152 true Chr_03: 791546-798697 Setaria viridis
Sevir.3G013700 5.0kb downstream 5.0kb downstream 5000 false Chr_03: 793698-798697 Setaria viridis
Sevir.3G013700 10.0kb upstream 10.0kb upstream 12152 true Chr_03: 781546-793697 Setaria viridis
Sevir.3G013700 10.0kb upstream 10.0kb upstream 10000 false Chr_03: 781546-791545 Setaria viridis
Sevir.3G013700 10.0kb downstream 10.0kb downstream 12152 true Chr_03: 791546-803697 Setaria viridis
Sevir.3G013700 10.0kb downstream 10.0kb downstream 10000 false Chr_03: 793698-803697 Setaria viridis

0 Protein Family

19 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 59.686     High  
cufflinks 71.293     High  
cufflinks 87.046     High  
cufflinks 80.716     High  
cufflinks 93.705     High High
cufflinks 63.446     High  
cufflinks 59.783     High  
cufflinks 80.575     High  
cufflinks 76.203     High  
cufflinks 76.226     High  
cufflinks 82.802     High  
cufflinks 68.3     High  
cufflinks 62.008     High  
cufflinks 87.613     High  
cufflinks 44.809     High Low
cufflinks 66.343     High  
cufflinks 41.305     High Low
cufflinks 100.814     High High
cufflinks 103.005     High High

0 Strain