Gene : Sevir.8G005700 S. viridis v1.1
Defline:  (1 of 2) PTHR21499//PTHR21499:SF33 - ASPARTATE KINASE // HOMOSERINE DEHYDROGENASE Genomic Order:  57
Name:  ? Sevir.8G005700 Secondary Identifier:  ? PAC:32633503
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY-724 Setaria viridis pathologic  
Sviridis PWY-3001 Setaria viridis pathologic  
Sviridis HOMOSERSYN-PWY Setaria viridis pathologic  
Sviridis THRESYN-PWY Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.8G005700 0.5kb upstream 0.5kb upstream 4616 true Chr_08: 383868-388483 Setaria viridis
Sevir.8G005700 0.5kb upstream 0.5kb upstream 500 false Chr_08: 383868-384367 Setaria viridis
Sevir.8G005700 0.5kb downstream 0.5kb downstream 4616 true Chr_08: 384368-388983 Setaria viridis
Sevir.8G005700 0.5kb downstream 0.5kb downstream 500 false Chr_08: 388484-388983 Setaria viridis
Sevir.8G005700 1.0kb upstream 1.0kb upstream 5116 true Chr_08: 383368-388483 Setaria viridis
Sevir.8G005700 1.0kb upstream 1.0kb upstream 1000 false Chr_08: 383368-384367 Setaria viridis
Sevir.8G005700 1.0kb downstream 1.0kb downstream 5116 true Chr_08: 384368-389483 Setaria viridis
Sevir.8G005700 1.0kb downstream 1.0kb downstream 1000 false Chr_08: 388484-389483 Setaria viridis
Sevir.8G005700 2.0kb upstream 2.0kb upstream 6116 true Chr_08: 382368-388483 Setaria viridis
Sevir.8G005700 2.0kb upstream 2.0kb upstream 2000 false Chr_08: 382368-384367 Setaria viridis
Sevir.8G005700 2.0kb downstream 2.0kb downstream 6116 true Chr_08: 384368-390483 Setaria viridis
Sevir.8G005700 2.0kb downstream 2.0kb downstream 2000 false Chr_08: 388484-390483 Setaria viridis
Sevir.8G005700 5.0kb upstream 5.0kb upstream 9116 true Chr_08: 379368-388483 Setaria viridis
Sevir.8G005700 5.0kb upstream 5.0kb upstream 5000 false Chr_08: 379368-384367 Setaria viridis
Sevir.8G005700 5.0kb downstream 5.0kb downstream 9116 true Chr_08: 384368-393483 Setaria viridis
Sevir.8G005700 5.0kb downstream 5.0kb downstream 5000 false Chr_08: 388484-393483 Setaria viridis
Sevir.8G005700 10.0kb upstream 10.0kb upstream 14116 true Chr_08: 374368-388483 Setaria viridis
Sevir.8G005700 10.0kb upstream 10.0kb upstream 10000 false Chr_08: 374368-384367 Setaria viridis
Sevir.8G005700 10.0kb downstream 10.0kb downstream 14116 true Chr_08: 384368-398483 Setaria viridis
Sevir.8G005700 10.0kb downstream 10.0kb downstream 10000 false Chr_08: 388484-398483 Setaria viridis

0 Protein Family

19 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.125        
cufflinks 7.193        
cufflinks 5.457       Low
cufflinks 5.346       Low
cufflinks 6.001       Low
cufflinks 6.768        
cufflinks 9.133       High
cufflinks 5.737       Low
cufflinks 9.669       High
cufflinks 6.748        
cufflinks 7.267        
cufflinks 7.706        
cufflinks 6.19        
cufflinks 7.406        
cufflinks 7.61        
cufflinks 10.306       High
cufflinks 9.487       High
cufflinks 8.502        
cufflinks 7.984        

0 Strain