Gene : Sevir.4G008700 S. viridis v1.1
Defline:  (1 of 1) K12668 - oligosaccharyltransferase complex subunit epsilon (OST2, DAD1) Genomic Order:  87
Name:  ? Sevir.4G008700 Secondary Identifier:  ? PAC:32646682
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.4G008700 0.5kb upstream 0.5kb upstream 3698 true Chr_04: 669011-672708 Setaria viridis
Sevir.4G008700 0.5kb upstream 0.5kb upstream 500 false Chr_04: 669011-669510 Setaria viridis
Sevir.4G008700 0.5kb downstream 0.5kb downstream 3698 true Chr_04: 669511-673208 Setaria viridis
Sevir.4G008700 0.5kb downstream 0.5kb downstream 500 false Chr_04: 672709-673208 Setaria viridis
Sevir.4G008700 1.0kb upstream 1.0kb upstream 4198 true Chr_04: 668511-672708 Setaria viridis
Sevir.4G008700 1.0kb upstream 1.0kb upstream 1000 false Chr_04: 668511-669510 Setaria viridis
Sevir.4G008700 1.0kb downstream 1.0kb downstream 4198 true Chr_04: 669511-673708 Setaria viridis
Sevir.4G008700 1.0kb downstream 1.0kb downstream 1000 false Chr_04: 672709-673708 Setaria viridis
Sevir.4G008700 2.0kb upstream 2.0kb upstream 5198 true Chr_04: 667511-672708 Setaria viridis
Sevir.4G008700 2.0kb upstream 2.0kb upstream 2000 false Chr_04: 667511-669510 Setaria viridis
Sevir.4G008700 2.0kb downstream 2.0kb downstream 5198 true Chr_04: 669511-674708 Setaria viridis
Sevir.4G008700 2.0kb downstream 2.0kb downstream 2000 false Chr_04: 672709-674708 Setaria viridis
Sevir.4G008700 5.0kb upstream 5.0kb upstream 8198 true Chr_04: 664511-672708 Setaria viridis
Sevir.4G008700 5.0kb upstream 5.0kb upstream 5000 false Chr_04: 664511-669510 Setaria viridis
Sevir.4G008700 5.0kb downstream 5.0kb downstream 8198 true Chr_04: 669511-677708 Setaria viridis
Sevir.4G008700 5.0kb downstream 5.0kb downstream 5000 false Chr_04: 672709-677708 Setaria viridis
Sevir.4G008700 10.0kb upstream 10.0kb upstream 13198 true Chr_04: 659511-672708 Setaria viridis
Sevir.4G008700 10.0kb upstream 10.0kb upstream 10000 false Chr_04: 659511-669510 Setaria viridis
Sevir.4G008700 10.0kb downstream 10.0kb downstream 13198 true Chr_04: 669511-682708 Setaria viridis
Sevir.4G008700 10.0kb downstream 10.0kb downstream 10000 false Chr_04: 672709-682708 Setaria viridis

0 Protein Family

19 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.33       Low
cufflinks 6.156       Low
cufflinks 19.409     High High
cufflinks 6.139       Low
cufflinks 6.341       Low
cufflinks 19.79     High High
cufflinks 12.614     High  
cufflinks 16.924     High High
cufflinks 5.263       Low
cufflinks 8.155        
cufflinks 19.144     High High
cufflinks 8.946        
cufflinks 17.892     High High
cufflinks 10.629        
cufflinks 7.574        
cufflinks 13.406     High  
cufflinks 9.878        
cufflinks 13.81     High  
cufflinks 10.7        

0 Strain